Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 AL135905.2-201ENST00000584934 1404 ntBASIC17.92■□□□□ 0.46
COL21A1Q96P44 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 AL353807.1-201ENST00000427475 662 ntBASIC17.92■□□□□ 0.46
COL21A1Q96P44 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 AP006294.2-201ENST00000641667 209 ntBASIC17.92■□□□□ 0.46
COL21A1Q96P44 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL21A1Q96P44 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COL21A1Q96P44 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 AC007613.1-201ENST00000572811 2597 ntBASIC17.91■□□□□ 0.46
COL21A1Q96P44 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL21A1Q96P44 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
COL21A1Q96P44 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL21A1Q96P44 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.9■□□□□ 0.46
COL21A1Q96P44 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL21A1Q96P44 AC079598.2-202ENST00000546624 1451 ntBASIC17.9■□□□□ 0.46
COL21A1Q96P44 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL21A1Q96P44 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL21A1Q96P44 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL21A1Q96P44 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.9■□□□□ 0.46
COL21A1Q96P44 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
COL21A1Q96P44 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.9■□□□□ 0.46
COL21A1Q96P44 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
COL21A1Q96P44 AP002982.1-201ENST00000492365 877 ntBASIC17.9■□□□□ 0.46
COL21A1Q96P44 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL21A1Q96P44 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL21A1Q96P44 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.9■□□□□ 0.46
COL21A1Q96P44 AC006333.2-201ENST00000607957 2099 ntBASIC17.9■□□□□ 0.46
COL21A1Q96P44 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
COL21A1Q96P44 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.9■□□□□ 0.46
COL21A1Q96P44 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL21A1Q96P44 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL21A1Q96P44 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL21A1Q96P44 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
COL21A1Q96P44 CROCCP3-202ENST00000420820 1947 ntBASIC17.9■□□□□ 0.46
COL21A1Q96P44 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
COL21A1Q96P44 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
COL21A1Q96P44 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.89■□□□□ 0.46
COL21A1Q96P44 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
COL21A1Q96P44 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
COL21A1Q96P44 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms