Protein–RNA interactions for Protein: Q96JH7

VCPIP1, Deubiquitinating protein VCIP135, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1Q96JH7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 UBE2SP1-201ENST00000450587 669 ntBASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 CKBP1-201ENST00000565489 1086 ntBASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 MIR6786-201ENST00000616843 113 ntBASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
VCPIP1Q96JH7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 ANO7L1-203ENST00000602586 1720 ntBASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 AC008040.2-201ENST00000461049 708 ntBASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 B3GAT3P1-201ENST00000471720 806 ntBASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 AC011506.1-201ENST00000474329 610 ntBASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 KRT8P32-201ENST00000512863 1461 ntBASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VCPIP1Q96JH7 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 FAM207BP-201ENST00000447172 505 ntBASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 AC068587.9-201ENST00000641814 219 ntBASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
VCPIP1Q96JH7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 MESTP1-201ENST00000404287 994 ntBASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 AC008550.1-201ENST00000511500 884 ntBASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 CD177P1-201ENST00000606252 935 ntBASIC19.95■□□□□ 0.78
VCPIP1Q96JH7 AP000692.2-201ENST00000608391 879 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms