Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF34Q969K3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF34Q969K3 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RNF34Q969K3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF34Q969K3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF34Q969K3 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF34Q969K3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF34Q969K3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF34Q969K3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF34Q969K3 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.84■□□□□ 0.77
RNF34Q969K3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF34Q969K3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF34Q969K3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RNF34Q969K3 CKBP1-201ENST00000565489 1086 ntBASIC19.84■□□□□ 0.77
RNF34Q969K3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF34Q969K3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RNF34Q969K3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF34Q969K3 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF34Q969K3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF34Q969K3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
RNF34Q969K3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF34Q969K3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.83■□□□□ 0.77
RNF34Q969K3 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF34Q969K3 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF34Q969K3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
RNF34Q969K3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF34Q969K3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF34Q969K3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF34Q969K3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RNF34Q969K3 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF34Q969K3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
RNF34Q969K3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.77
RNF34Q969K3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF34Q969K3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF34Q969K3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF34Q969K3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF34Q969K3 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.83■□□□□ 0.77
RNF34Q969K3 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.83■□□□□ 0.77
RNF34Q969K3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF34Q969K3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF34Q969K3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RNF34Q969K3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RNF34Q969K3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF34Q969K3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RNF34Q969K3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF34Q969K3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF34Q969K3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF34Q969K3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF34Q969K3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF34Q969K3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
RNF34Q969K3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF34Q969K3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
RNF34Q969K3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF34Q969K3 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF34Q969K3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RNF34Q969K3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.83■□□□□ 0.76
RNF34Q969K3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF34Q969K3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF34Q969K3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF34Q969K3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF34Q969K3 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
RNF34Q969K3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF34Q969K3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF34Q969K3 HTR7P1-202ENST00000624664 4411 ntBASIC19.82■□□□□ 0.76
RNF34Q969K3 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF34Q969K3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF34Q969K3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
RNF34Q969K3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.82■□□□□ 0.76
RNF34Q969K3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.82■□□□□ 0.76
RNF34Q969K3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.82■□□□□ 0.76
RNF34Q969K3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF34Q969K3 FITM1-202ENST00000559294 800 ntBASIC19.82■□□□□ 0.76
RNF34Q969K3 AC073912.3-201ENST00000624414 853 ntBASIC19.82■□□□□ 0.76
RNF34Q969K3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF34Q969K3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RNF34Q969K3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF34Q969K3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RNF34Q969K3 AC096733.2-201ENST00000609937 1394 ntBASIC19.82■□□□□ 0.76
RNF34Q969K3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RNF34Q969K3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF34Q969K3 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF34Q969K3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF34Q969K3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.81■□□□□ 0.76
RNF34Q969K3 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF34Q969K3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
RNF34Q969K3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF34Q969K3 AP005242.2-201ENST00000580065 1175 ntBASIC19.81■□□□□ 0.76
RNF34Q969K3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.81■□□□□ 0.76
RNF34Q969K3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.81■□□□□ 0.76
RNF34Q969K3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF34Q969K3 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF34Q969K3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF34Q969K3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RNF34Q969K3 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF34Q969K3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
RNF34Q969K3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF34Q969K3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF34Q969K3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RNF34Q969K3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RNF34Q969K3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms