Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
YTHDF3Q7Z739 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 AL356652.1-201ENST00000615962 565 ntBASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 AC120498.10-201ENST00000621827 505 ntBASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 NKILA-202ENST00000614771 2598 ntBASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
YTHDF3Q7Z739 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 AC080038.1-201ENST00000611274 1154 ntBASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 KRT8P20-201ENST00000423953 1409 ntBASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 AL391005.1-201ENST00000623953 2435 ntBASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 AC090340.1-201ENST00000620778 4980 ntBASIC18.79■□□□□ 0.6
YTHDF3Q7Z739 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
YTHDF3Q7Z739 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
YTHDF3Q7Z739 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
YTHDF3Q7Z739 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms