Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 OS9-210ENST00000549307 3870 ntTSL 29.05□□□□□ -0.965e-9■■□□□ 13.1
LARP4Q71RC2 UBA52-212ENST00000599256 927 ntTSL 221.45■■□□□ 1.022e-8■■□□□ 13.1
LARP4Q71RC2 UBA52-211ENST00000598814 550 ntTSL 1 (best)14.03□□□□□ -0.162e-8■■□□□ 13.1
LARP4Q71RC2 RPL23-205ENST00000470646 333 ntTSL 312.18□□□□□ -0.462e-47■■□□□ 13.1
LARP4Q71RC2 RPL23-202ENST00000378096 392 ntTSL 311.15□□□□□ -0.622e-47■■□□□ 13.1
LARP4Q71RC2 TTR-203ENST00000541025 956 ntTSL 27.15□□□□□ -1.262e-10■■□□□ 13.1
LARP4Q71RC2 RPS3-214ENST00000530164 1878 ntTSL 1 (best) BASIC9.42□□□□□ -0.92e-17■■□□□ 13.1
LARP4Q71RC2 ACSF2-218ENST00000510410 1745 ntTSL 224.31■■□□□ 1.481e-7■■□□□ 13.1
LARP4Q71RC2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.1■■□□□ 1.291e-7■■□□□ 13.1
LARP4Q71RC2 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.06■■□□□ 1.121e-7■■□□□ 13.1
LARP4Q71RC2 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.551e-7■■□□□ 13.1
LARP4Q71RC2 ACSF2-213ENST00000507792 716 ntTSL 214.48□□□□□ -0.091e-7■■□□□ 13.1
LARP4Q71RC2 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.11□□□□□ -0.151e-7■■□□□ 13.1
LARP4Q71RC2 ACSF2-210ENST00000506085 864 ntTSL 1 (best)10.7□□□□□ -0.71e-7■■□□□ 13.1
LARP4Q71RC2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC15.98■□□□□ 0.153e-9■■□□□ 13.1
LARP4Q71RC2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.023e-9■■□□□ 13.1
LARP4Q71RC2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.01■□□□□ 0.795e-32■■□□□ 13.1
LARP4Q71RC2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.65■□□□□ 0.269e-9■■□□□ 13
LARP4Q71RC2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.259e-9■■□□□ 13
LARP4Q71RC2 PIH1D1-221ENST00000601807 998 ntTSL 516.19■□□□□ 0.189e-9■■□□□ 13
LARP4Q71RC2 HSPG2-211ENST00000486901 3586 ntTSL 212.36□□□□□ -0.436e-12■■□□□ 13
LARP4Q71RC2 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.156e-12■■□□□ 13
LARP4Q71RC2 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.79■□□□□ 0.761e-7■■□□□ 13
LARP4Q71RC2 GAS5-222ENST00000451607 1007 ntTSL 5 BASIC10.77□□□□□ -0.691e-11■■□□□ 13
LARP4Q71RC2 GAS5-224ENST00000454068 688 ntTSL 5 BASIC9.32□□□□□ -0.921e-11■■□□□ 13
LARP4Q71RC2 GAS5-211ENST00000432536 959 ntTSL 2 BASIC7.13□□□□□ -1.271e-11■■□□□ 13
LARP4Q71RC2 GAS5-228ENST00000456812 723 ntTSL 36.33□□□□□ -1.41e-11■■□□□ 13
LARP4Q71RC2 GAS5-206ENST00000422183 745 ntTSL 25.91□□□□□ -1.461e-11■■□□□ 13
LARP4Q71RC2 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.41□□□□□ -1.541e-11■■□□□ 13
LARP4Q71RC2 GAS5-215ENST00000442067 1114 ntTSL 25.15□□□□□ -1.591e-11■■□□□ 13
LARP4Q71RC2 GAS5-205ENST00000422008 497 ntTSL 34.64□□□□□ -1.671e-11■■□□□ 13
LARP4Q71RC2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.84□□□□□ -1.791e-11■■□□□ 13
LARP4Q71RC2 GAS5-213ENST00000436285 772 ntTSL 23.42□□□□□ -1.861e-11■■□□□ 13
LARP4Q71RC2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.23■■□□□ 1.151e-6■■□□□ 13
LARP4Q71RC2 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.8■■□□□ 1.246e-18■■□□□ 13
LARP4Q71RC2 TRAP1-213ENST00000575707 785 ntTSL 515.01□□□□□ -0.016e-18■■□□□ 13
LARP4Q71RC2 TRAP1-210ENST00000574494 547 ntTSL 213.63□□□□□ -0.236e-18■■□□□ 13
LARP4Q71RC2 TRAP1-212ENST00000575671 2309 ntTSL 1 (best) BASIC12.48□□□□□ -0.416e-18■■□□□ 13
LARP4Q71RC2 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.426e-18■■□□□ 13
LARP4Q71RC2 FGA-203ENST00000622532 1130 ntTSL 5 BASIC9.48□□□□□ -0.891e-17■■□□□ 13
LARP4Q71RC2 FGA-202ENST00000403106 2248 ntTSL 1 (best) BASIC8.99□□□□□ -0.971e-17■■□□□ 13
LARP4Q71RC2 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.271e-17■■□□□ 13
LARP4Q71RC2 MTCH2-203ENST00000530428 930 ntTSL 517.24■□□□□ 0.351e-8■■□□□ 13
LARP4Q71RC2 TRIR-203ENST00000589590 930 ntTSL 216.23■□□□□ 0.191e-8■■□□□ 13
LARP4Q71RC2 NDUFB4-204ENST00000491335 558 ntTSL 216.97■□□□□ 0.314e-7■■□□□ 13
LARP4Q71RC2 NDUFB4-203ENST00000485064 1426 ntTSL 1 (best) BASIC9.2□□□□□ -0.944e-7■■□□□ 13
LARP4Q71RC2 NDUFB4-205ENST00000492739 309 ntTSL 2 BASIC9.03□□□□□ -0.964e-7■■□□□ 13
LARP4Q71RC2 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.354e-7■■□□□ 13
LARP4Q71RC2 FUS-203ENST00000474990 827 ntTSL 320.61■□□□□ 0.895e-15■■□□□ 13
LARP4Q71RC2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.938e-11■■□□□ 13
LARP4Q71RC2 ANKRD11-211ENST00000566973 442 ntTSL 218.33■□□□□ 0.528e-11■■□□□ 13
LARP4Q71RC2 PRSS21-207ENST00000574813 873 ntTSL 317.35■□□□□ 0.378e-11■■□□□ 13
LARP4Q71RC2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.58■□□□□ 0.088e-11■■□□□ 13
LARP4Q71RC2 TMEM50B-201ENST00000420455 3062 ntTSL 1 (best)13.12□□□□□ -0.318e-11■■□□□ 13
LARP4Q71RC2 PRSS21-206ENST00000574265 860 ntTSL 311.61□□□□□ -0.558e-11■■□□□ 13
LARP4Q71RC2 TMEM50B-209ENST00000484377 695 ntTSL 28.41□□□□□ -1.068e-11■■□□□ 13
LARP4Q71RC2 PRSS21-209ENST00000575739 378 ntTSL 37.99□□□□□ -1.138e-11■■□□□ 13
LARP4Q71RC2 RPS3-201ENST00000278572 907 ntTSL 3 BASIC13.46□□□□□ -0.258e-16■■□□□ 13
LARP4Q71RC2 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.488e-16■■□□□ 13
LARP4Q71RC2 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.518e-16■■□□□ 13
LARP4Q71RC2 RPS3-218ENST00000532872 737 ntTSL 311.66□□□□□ -0.548e-16■■□□□ 13
LARP4Q71RC2 RPS3-216ENST00000530721 796 ntTSL 311.66□□□□□ -0.548e-16■■□□□ 13
LARP4Q71RC2 RPS3-202ENST00000422465 903 ntTSL 210.3□□□□□ -0.768e-16■■□□□ 13
LARP4Q71RC2 RPS3-210ENST00000528439 473 ntTSL 39.7□□□□□ -0.868e-16■■□□□ 13
LARP4Q71RC2 RPS3-219ENST00000534440 564 ntTSL 2 BASIC9.7□□□□□ -0.868e-16■■□□□ 13
LARP4Q71RC2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.783e-6■■□□□ 13
LARP4Q71RC2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.63■■□□□ 1.692e-11■■□□□ 13
LARP4Q71RC2 EXOC3L4-207ENST00000560925 2341 ntTSL 223.81■■□□□ 1.43e-6■■□□□ 13
LARP4Q71RC2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.263e-6■■□□□ 13
LARP4Q71RC2 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.232e-11■■□□□ 13
LARP4Q71RC2 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.153e-6■■□□□ 13
LARP4Q71RC2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.013e-6■■□□□ 13
LARP4Q71RC2 ANKMY1-213ENST00000418505 568 ntTSL 420.88■□□□□ 0.933e-6■■□□□ 13
LARP4Q71RC2 TRAF4-207ENST00000461195 787 ntTSL 220.58■□□□□ 0.893e-6■■□□□ 13
LARP4Q71RC2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.24■□□□□ 0.833e-6■■□□□ 13
LARP4Q71RC2 EXOC3L4-206ENST00000560304 657 ntTSL 320.1■□□□□ 0.813e-6■■□□□ 13
LARP4Q71RC2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.08■□□□□ 0.83e-6■■□□□ 13
LARP4Q71RC2 TRAF4-204ENST00000422344 631 ntTSL 320.03■□□□□ 0.83e-6■■□□□ 13
LARP4Q71RC2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.97■□□□□ 0.793e-6■■□□□ 13
LARP4Q71RC2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.95■□□□□ 0.783e-6■■□□□ 13
LARP4Q71RC2 VPS72-202ENST00000368892 1527 ntAPPRIS P1 TSL 1 (best)19.55■□□□□ 0.723e-6■■□□□ 13
LARP4Q71RC2 RBM14-207ENST00000461478 693 ntTSL 219.18■□□□□ 0.663e-6■■□□□ 13
LARP4Q71RC2 TRAF4-203ENST00000394925 702 ntTSL 219.07■□□□□ 0.643e-6■■□□□ 13
LARP4Q71RC2 ANKMY1-214ENST00000418708 945 ntTSL 318.46■□□□□ 0.553e-6■■□□□ 13
LARP4Q71RC2 RBM14-206ENST00000460762 459 ntTSL 218.44■□□□□ 0.543e-6■■□□□ 13
LARP4Q71RC2 ANKMY1-219ENST00000464991 1221 ntTSL 1 (best)18.35■□□□□ 0.533e-6■■□□□ 13
LARP4Q71RC2 C21orf2-204ENST00000462742 4532 ntTSL 218.18■□□□□ 0.53e-6■■□□□ 13
LARP4Q71RC2 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.473e-6■■□□□ 13
LARP4Q71RC2 TRAF4-216ENST00000586813 789 ntTSL 317.53■□□□□ 0.43e-6■■□□□ 13
LARP4Q71RC2 VPS72-201ENST00000354473 1347 ntTSL 317.23■□□□□ 0.353e-6■■□□□ 13
LARP4Q71RC2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.331e-14■■□□□ 13
LARP4Q71RC2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.283e-6■■□□□ 13
LARP4Q71RC2 RBM14-209ENST00000512283 567 ntTSL 416.78■□□□□ 0.283e-6■■□□□ 13
LARP4Q71RC2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.273e-6■■□□□ 13
LARP4Q71RC2 EXOC3L4-204ENST00000559693 813 ntTSL 316.6■□□□□ 0.253e-6■■□□□ 13
LARP4Q71RC2 C21orf2-205ENST00000470196 654 ntTSL 216.44■□□□□ 0.223e-6■■□□□ 13
LARP4Q71RC2 EXOC3L4-203ENST00000559661 665 ntTSL 516.36■□□□□ 0.213e-6■■□□□ 13
LARP4Q71RC2 C21orf2-207ENST00000496321 1191 ntTSL 1 (best)16.36■□□□□ 0.213e-6■■□□□ 13
LARP4Q71RC2 RPL12-203ENST00000497322 2275 ntTSL 216.2■□□□□ 0.183e-6■■□□□ 13
LARP4Q71RC2 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.173e-6■■□□□ 13
Retrieved 100 of 15,922 protein–RNA pairs in 237.5 ms