Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 AC233263.1-201ENST00000578059 224 ntBASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 AC116351.2-201ENST00000606540 1585 ntBASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 AL512353.2-201ENST00000448759 1962 ntBASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF111Q6ZNA4 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 AC018553.1-201ENST00000616682 1458 ntBASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF111Q6ZNA4 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF111Q6ZNA4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF111Q6ZNA4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF111Q6ZNA4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF111Q6ZNA4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF111Q6ZNA4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 AC099398.1-201ENST00000567919 2776 ntBASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF111Q6ZNA4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF111Q6ZNA4 MTDHP1-201ENST00000605323 784 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms