Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.27■□□□□ 0.35
NIPAL3Q6P499 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NIPAL3Q6P499 AC005082.1-201ENST00000413042 2259 ntBASIC17.27■□□□□ 0.35
NIPAL3Q6P499 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NIPAL3Q6P499 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
NIPAL3Q6P499 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
NIPAL3Q6P499 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
NIPAL3Q6P499 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NIPAL3Q6P499 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NIPAL3Q6P499 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NIPAL3Q6P499 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
NIPAL3Q6P499 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.27■□□□□ 0.35
NIPAL3Q6P499 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NIPAL3Q6P499 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 IRX1P1-201ENST00000438849 1838 ntBASIC17.26■□□□□ 0.35
NIPAL3Q6P499 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 C1QL1P1-201ENST00000568105 661 ntBASIC17.26■□□□□ 0.35
NIPAL3Q6P499 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 AC090164.3-201ENST00000610780 2143 ntBASIC17.26■□□□□ 0.35
NIPAL3Q6P499 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NIPAL3Q6P499 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 AL512353.2-201ENST00000448759 1962 ntBASIC17.25■□□□□ 0.35
NIPAL3Q6P499 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.25■□□□□ 0.35
NIPAL3Q6P499 AC079598.2-202ENST00000546624 1451 ntBASIC17.24■□□□□ 0.35
NIPAL3Q6P499 HTR7P1-201ENST00000538670 1336 ntBASIC17.24■□□□□ 0.35
NIPAL3Q6P499 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NIPAL3Q6P499 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms