Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRNP1Q6NT89 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRNP1Q6NT89 AC068587.9-201ENST00000641814 219 ntBASIC19.75■□□□□ 0.75
TRNP1Q6NT89 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRNP1Q6NT89 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRNP1Q6NT89 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.75■□□□□ 0.75
TRNP1Q6NT89 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.75■□□□□ 0.75
TRNP1Q6NT89 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRNP1Q6NT89 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRNP1Q6NT89 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRNP1Q6NT89 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRNP1Q6NT89 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRNP1Q6NT89 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 CYP2D8P-201ENST00000433633 1490 ntBASIC19.74■□□□□ 0.75
TRNP1Q6NT89 KRT8P32-201ENST00000512863 1461 ntBASIC19.74■□□□□ 0.75
TRNP1Q6NT89 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 MTMR9LP-203ENST00000426597 1545 ntBASIC19.74■□□□□ 0.75
TRNP1Q6NT89 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRNP1Q6NT89 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 MIR4674-201ENST00000582457 87 ntBASIC19.73■□□□□ 0.75
TRNP1Q6NT89 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRNP1Q6NT89 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.72■□□□□ 0.75
TRNP1Q6NT89 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.72■□□□□ 0.75
TRNP1Q6NT89 HEIH-201ENST00000623091 1652 ntBASIC19.72■□□□□ 0.75
TRNP1Q6NT89 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 INGX-201ENST00000359239 846 ntBASIC19.72■□□□□ 0.75
TRNP1Q6NT89 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.72■□□□□ 0.75
TRNP1Q6NT89 AL023803.3-201ENST00000615559 522 ntBASIC19.72■□□□□ 0.75
TRNP1Q6NT89 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.72■□□□□ 0.75
TRNP1Q6NT89 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRNP1Q6NT89 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 156.9 ms