Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 RNF152P1-201ENST00000397754 604 ntBASIC17.11■□□□□ 0.33
RTL6Q6ICC9 FAM8A6P-201ENST00000407496 1135 ntBASIC17.11■□□□□ 0.33
RTL6Q6ICC9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 COX11P1-201ENST00000489116 835 ntBASIC17.11■□□□□ 0.33
RTL6Q6ICC9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RTL6Q6ICC9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.1■□□□□ 0.33
RTL6Q6ICC9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 TSPY5P-201ENST00000426936 936 ntBASIC17.1■□□□□ 0.33
RTL6Q6ICC9 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 AP003041.3-201ENST00000527151 707 ntBASIC17.1■□□□□ 0.33
RTL6Q6ICC9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 MYC-208ENST00000641036 567 ntBASIC17.1■□□□□ 0.33
RTL6Q6ICC9 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RTL6Q6ICC9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 AC011558.1-201ENST00000623459 338 ntBASIC17.09■□□□□ 0.33
RTL6Q6ICC9 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
RTL6Q6ICC9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTL6Q6ICC9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
RTL6Q6ICC9 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTL6Q6ICC9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RTL6Q6ICC9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
RTL6Q6ICC9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RTL6Q6ICC9 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 LINC01238-205ENST00000567549 1107 ntBASIC17.08■□□□□ 0.32
RTL6Q6ICC9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RTL6Q6ICC9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms