Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 BX323043.1-201ENST00000641006 1765 ntBASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 BX088651.1-201ENST00000540551 451 ntBASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCSMST1Q4G0I0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 AC008622.2-201ENST00000617006 1229 ntBASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 TNXA-203ENST00000507684 2038 ntBASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CCSMST1Q4G0I0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CCSMST1Q4G0I0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 MMP23A-201ENST00000234610 1017 ntBASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 INGX-201ENST00000359239 846 ntBASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 AC010947.1-201ENST00000623454 693 ntBASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.4■□□□□ 0.54
CCSMST1Q4G0I0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCSMST1Q4G0I0 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCSMST1Q4G0I0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CCSMST1Q4G0I0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CCSMST1Q4G0I0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CCSMST1Q4G0I0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCSMST1Q4G0I0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCSMST1Q4G0I0 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.39■□□□□ 0.53
CCSMST1Q4G0I0 AC004408.2-201ENST00000623613 2777 ntBASIC18.39■□□□□ 0.53
CCSMST1Q4G0I0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCSMST1Q4G0I0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCSMST1Q4G0I0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCSMST1Q4G0I0 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms