Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
SYCNQ0VAF6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 AC004408.2-201ENST00000623613 2777 ntBASIC12.55□□□□□ -0.4
SYCNQ0VAF6 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 TSPY21P-201ENST00000433481 731 ntBASIC12.55□□□□□ -0.4
SYCNQ0VAF6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 CD99P1-205ENST00000527459 561 ntBASIC12.55□□□□□ -0.4
SYCNQ0VAF6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC12.55□□□□□ -0.4
SYCNQ0VAF6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 ADM-205ENST00000528544 586 ntTSL 2 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 AC110285.5-201ENST00000611501 352 ntBASIC12.54□□□□□ -0.4
SYCNQ0VAF6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 HLA-A-209ENST00000638375 975 ntBASIC12.54□□□□□ -0.4
SYCNQ0VAF6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SYCNQ0VAF6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 UBQLN4P1-201ENST00000461599 1801 ntBASIC12.53□□□□□ -0.4
SYCNQ0VAF6 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
SYCNQ0VAF6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms