Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 DQX1-203ENST00000418139 1688 ntTSL 59.4□□□□□ -0.93e-6■□□□□ 10.2
LSM11P83369 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.65■□□□□ 0.99e-7■□□□□ 10.2
LSM11P83369 HMGN2-205ENST00000466194 952 ntTSL 215.68■□□□□ 0.19e-7■□□□□ 10.2
LSM11P83369 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.399e-7■□□□□ 10.2
LSM11P83369 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.84□□□□□ -0.519e-7■□□□□ 10.2
LSM11P83369 ARAP3-204ENST00000512390 3179 ntTSL 211.7□□□□□ -0.549e-7■□□□□ 10.2
LSM11P83369 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC11.21□□□□□ -0.619e-7■□□□□ 10.2
LSM11P83369 ARAP3-205ENST00000513878 3810 ntTSL 2 BASIC10.55□□□□□ -0.729e-7■□□□□ 10.2
LSM11P83369 LINC01169-201ENST00000558797 833 ntTSL 1 (best) BASIC10.28□□□□□ -0.769e-7■□□□□ 10.2
LSM11P83369 FAR2P4-202ENST00000425399 584 ntBASIC7.11□□□□□ -1.279e-7■□□□□ 10.2
LSM11P83369 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.395e-6■□□□□ 10.2
LSM11P83369 PICK1-214ENST00000484021 2531 ntTSL 220.64■□□□□ 0.895e-6■□□□□ 10.2
LSM11P83369 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.835e-6■□□□□ 10.2
LSM11P83369 SLC51A-209ENST00000475672 1208 ntTSL 1 (best)9.65□□□□□ -0.868e-10■□□□□ 10.2
LSM11P83369 TTLL3-218ENST00000443148 2031 ntTSL 214.37□□□□□ -0.112e-7■□□□□ 10.2
LSM11P83369 ACADVL-216ENST00000578824 720 ntTSL 29.1□□□□□ -0.951e-7■□□□□ 10.2
LSM11P83369 PGPEP1-207ENST00000597663 363 ntTSL 313.54□□□□□ -0.246e-8■□□□□ 10.2
LSM11P83369 PGPEP1-204ENST00000595552 418 ntTSL 210.04□□□□□ -0.86e-8■□□□□ 10.2
LSM11P83369 PGPEP1-202ENST00000269919 7092 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.846e-8■□□□□ 10.2
LSM11P83369 TMC6-210ENST00000588792 843 ntTSL 216.06■□□□□ 0.161e-7■□□□□ 10.2
LSM11P83369 TMC6-211ENST00000589271 1099 ntTSL 515.34■□□□□ 0.051e-7■□□□□ 10.2
LSM11P83369 TMC6-223ENST00000592594 551 ntTSL 414.39□□□□□ -0.111e-7■□□□□ 10.2
LSM11P83369 TMC6-205ENST00000586126 821 ntTSL 314.32□□□□□ -0.121e-7■□□□□ 10.2
LSM11P83369 TMC6-207ENST00000586697 571 ntTSL 413.23□□□□□ -0.291e-7■□□□□ 10.2
LSM11P83369 TMC6-221ENST00000592063 743 ntTSL 512.21□□□□□ -0.451e-7■□□□□ 10.2
LSM11P83369 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.913e-6■□□□□ 10.2
LSM11P83369 CYP2W1-203ENST00000415893 890 ntTSL 315.73■□□□□ 0.116e-9■□□□□ 10.2
LSM11P83369 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.046e-9■□□□□ 10.2
LSM11P83369 RAD9A-204ENST00000535644 1624 ntTSL 314.27□□□□□ -0.123e-6■□□□□ 10.2
LSM11P83369 SBF1-206ENST00000473724 446 ntTSL 211.42□□□□□ -0.586e-9■□□□□ 10.2
LSM11P83369 DCXR-205ENST00000577996 98 ntTSL 3-0.8□□□□□ -2.546e-9■□□□□ 10.2
LSM11P83369 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.83□□□□□ -0.046e-15■□□□□ 10.2
LSM11P83369 ENOSF1-214ENST00000582745 1096 ntTSL 212.56□□□□□ -0.46e-10■□□□□ 10.2
LSM11P83369 ENOSF1-213ENST00000581928 443 ntTSL 211.97□□□□□ -0.496e-10■□□□□ 10.2
LSM11P83369 ENOSF1-212ENST00000581906 619 ntTSL 211.41□□□□□ -0.586e-10■□□□□ 10.2
LSM11P83369 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.822e-6■□□□□ 10.2
LSM11P83369 ENOSF1-216ENST00000583973 2057 ntTSL 59.67□□□□□ -0.866e-10■□□□□ 10.2
LSM11P83369 ENOSF1-219ENST00000584646 752 ntTSL 28.75□□□□□ -1.016e-10■□□□□ 10.2
LSM11P83369 ENOSF1-217ENST00000584259 6340 ntTSL 28.75□□□□□ -1.016e-10■□□□□ 10.2
LSM11P83369 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.577e-7■□□□□ 10.1
LSM11P83369 NISCH-213ENST00000489895 5350 ntTSL 214.92□□□□□ -0.027e-7■□□□□ 10.1
LSM11P83369 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.467e-7■□□□□ 10.1
LSM11P83369 SLC5A9-205ENST00000471020 1989 ntTSL 1 (best)14.12□□□□□ -0.153e-10■□□□□ 10.1
LSM11P83369 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.22■■□□□ 1.314e-7■□□□□ 10.1
LSM11P83369 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.41■■□□□ 1.184e-7■□□□□ 10.1
LSM11P83369 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.96■■□□□ 1.114e-7■□□□□ 10.1
LSM11P83369 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.034e-7■□□□□ 10.1
LSM11P83369 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.13■□□□□ 0.974e-7■□□□□ 10.1
LSM11P83369 YWHAH-204ENST00000443669 822 ntTSL 320.08■□□□□ 0.814e-7■□□□□ 10.1
LSM11P83369 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.93■□□□□ 0.624e-7■□□□□ 10.1
LSM11P83369 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.494e-7■□□□□ 10.1
LSM11P83369 MIIP-203ENST00000466860 1709 ntTSL 516.22■□□□□ 0.193e-19■□□□□ 10.1
LSM11P83369 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.124e-7■□□□□ 10.1
LSM11P83369 MIIP-207ENST00000498685 1392 ntTSL 215.17■□□□□ 0.023e-19■□□□□ 10.1
LSM11P83369 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.014e-7■□□□□ 10.1
LSM11P83369 MIIP-202ENST00000460823 955 ntTSL 513.77□□□□□ -0.213e-19■□□□□ 10.1
LSM11P83369 MIIP-205ENST00000478749 779 ntTSL 213.65□□□□□ -0.223e-19■□□□□ 10.1
LSM11P83369 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.243e-19■□□□□ 10.1
LSM11P83369 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.264e-7■□□□□ 10.1
LSM11P83369 PKM-214ENST00000565143 2301 ntTSL 1 (best)12□□□□□ -0.494e-7■□□□□ 10.1
LSM11P83369 PKM-222ENST00000568883 1863 ntTSL 5 BASIC11.84□□□□□ -0.514e-7■□□□□ 10.1
LSM11P83369 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.564e-7■□□□□ 10.1
LSM11P83369 SLC7A5-203ENST00000565644 3983 ntTSL 1 (best) BASIC10.61□□□□□ -0.714e-7■□□□□ 10.1
LSM11P83369 PKM-205ENST00000561609 1568 ntTSL 1 (best)10.42□□□□□ -0.744e-7■□□□□ 10.1
LSM11P83369 PKM-219ENST00000567118 2254 ntTSL 210.42□□□□□ -0.744e-7■□□□□ 10.1
LSM11P83369 YWHAH-206ENST00000479649 662 ntTSL 39.73□□□□□ -0.854e-7■□□□□ 10.1
LSM11P83369 PKM-212ENST00000564440 3016 ntTSL 1 (best)8.63□□□□□ -1.034e-7■□□□□ 10.1
LSM11P83369 ZNF107-202ENST00000360117 1061 ntTSL 1 (best)7.99□□□□□ -1.134e-7■□□□□ 10.1
LSM11P83369 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC7.47□□□□□ -1.214e-7■□□□□ 10.1
LSM11P83369 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.29□□□□□ -1.44e-7■□□□□ 10.1
LSM11P83369 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.72□□□□□ -1.494e-7■□□□□ 10.1
LSM11P83369 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.544e-7■□□□□ 10.1
LSM11P83369 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.21e-7■□□□□ 10.1
LSM11P83369 MT-TF-201ENST00000387314 71 ntBASIC3.09□□□□□ -1.911e-323■□□□□ 10.1
LSM11P83369 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC11.42□□□□□ -0.583e-40■□□□□ 10.1
LSM11P83369 NR2F2-AS1-210ENST00000561344 966 ntTSL 1 (best) BASIC10.4□□□□□ -0.743e-40■□□□□ 10.1
LSM11P83369 NR2F2-AS1-201ENST00000502125 1930 ntTSL 2 BASIC9.02□□□□□ -0.973e-40■□□□□ 10.1
LSM11P83369 NR2F2-AS1-203ENST00000558929 574 ntTSL 5 BASIC8.37□□□□□ -1.073e-40■□□□□ 10.1
LSM11P83369 TUBGCP6-202ENST00000425018 1509 ntTSL 1 (best)18.6■□□□□ 0.572e-8■□□□□ 10.1
LSM11P83369 TUBGCP6-208ENST00000498611 5274 ntTSL 1 (best)14.77□□□□□ -0.042e-8■□□□□ 10.1
LSM11P83369 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC14.38□□□□□ -0.112e-8■□□□□ 10.1
LSM11P83369 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.432e-8■□□□□ 10.1
LSM11P83369 TUBGCP6-207ENST00000491449 4044 ntTSL 511.45□□□□□ -0.582e-8■□□□□ 10.1
LSM11P83369 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.05■□□□□ 0.321e-7■□□□□ 10.1
LSM11P83369 AC011448.1-202ENST00000586674 1071 ntTSL 216.68■□□□□ 0.261e-7■□□□□ 10.1
LSM11P83369 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.52■□□□□ 0.241e-7■□□□□ 10.1
LSM11P83369 NDUFA13-202ENST00000502506 1166 ntTSL 214.1□□□□□ -0.151e-7■□□□□ 10.1
LSM11P83369 NDUFA13-205ENST00000511180 593 ntTSL 213.56□□□□□ -0.241e-7■□□□□ 10.1
LSM11P83369 ABCD4-212ENST00000484380 1823 ntTSL 313.27□□□□□ -0.291e-7■□□□□ 10.1
LSM11P83369 ABCD4-207ENST00000474270 794 ntTSL 511.74□□□□□ -0.531e-7■□□□□ 10.1
LSM11P83369 NDUFA13-207ENST00000606722 502 ntTSL 311□□□□□ -0.651e-7■□□□□ 10.1
LSM11P83369 NDUFA13-204ENST00000507754 991 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.781e-7■□□□□ 10.1
LSM11P83369 ACIN1-216ENST00000555478 1017 ntTSL 512.17□□□□□ -0.465e-9■□□□□ 10.1
LSM11P83369 ACIN1-215ENST00000555395 514 ntTSL 27.52□□□□□ -1.215e-9■□□□□ 10.1
LSM11P83369 SLC2A4RG-208ENST00000496425 502 ntTSL 215.06■□□□□ 01e-6■□□□□ 10.1
LSM11P83369 TBCD-222ENST00000576677 1926 ntTSL 1 (best)20.43■□□□□ 0.861e-7■□□□□ 10.1
LSM11P83369 TBCD-223ENST00000576691 929 ntTSL 315.07■□□□□ 01e-7■□□□□ 10.1
LSM11P83369 TBCD-226ENST00000577051 979 ntTSL 514.1□□□□□ -0.151e-7■□□□□ 10.1
LSM11P83369 TBCD-220ENST00000576432 684 ntTSL 213.96□□□□□ -0.171e-7■□□□□ 10.1
LSM11P83369 RETSAT-203ENST00000429806 2335 ntTSL 1 (best)11.5□□□□□ -0.571e-9■□□□□ 10.1
Retrieved 100 of 11,495 protein–RNA pairs in 50.6 ms