Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM4P67936 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.26■□□□□ 0.99
TPM4P67936 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
TPM4P67936 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.26■□□□□ 0.99
TPM4P67936 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
TPM4P67936 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TPM4P67936 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TPM4P67936 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TPM4P67936 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TPM4P67936 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM4P67936 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.25■□□□□ 0.99
TPM4P67936 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TPM4P67936 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TPM4P67936 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM4P67936 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM4P67936 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.25■□□□□ 0.99
TPM4P67936 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM4P67936 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.25■□□□□ 0.99
TPM4P67936 MAX-217ENST00000557277 728 ntTSL 3 BASIC21.25■□□□□ 0.99
TPM4P67936 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TPM4P67936 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM4P67936 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.25■□□□□ 0.99
TPM4P67936 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.25■□□□□ 0.99
TPM4P67936 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM4P67936 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
TPM4P67936 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.25■□□□□ 0.99
TPM4P67936 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TPM4P67936 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.24■□□□□ 0.99
TPM4P67936 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM4P67936 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TPM4P67936 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.24■□□□□ 0.99
TPM4P67936 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.24■□□□□ 0.99
TPM4P67936 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM4P67936 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC21.24■□□□□ 0.99
TPM4P67936 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
TPM4P67936 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
TPM4P67936 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
TPM4P67936 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.24■□□□□ 0.99
TPM4P67936 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM4P67936 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.24■□□□□ 0.99
TPM4P67936 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TPM4P67936 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.24■□□□□ 0.99
TPM4P67936 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM4P67936 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.24■□□□□ 0.99
TPM4P67936 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM4P67936 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM4P67936 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM4P67936 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM4P67936 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TPM4P67936 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TPM4P67936 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
TPM4P67936 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC21.23■□□□□ 0.99
TPM4P67936 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TPM4P67936 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM4P67936 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM4P67936 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.23■□□□□ 0.99
TPM4P67936 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.23■□□□□ 0.99
TPM4P67936 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
TPM4P67936 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
TPM4P67936 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
TPM4P67936 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.23■□□□□ 0.99
TPM4P67936 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
TPM4P67936 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
TPM4P67936 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.23■□□□□ 0.99
TPM4P67936 AL121906.2-201ENST00000621597 723 ntBASIC21.23■□□□□ 0.99
TPM4P67936 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.23■□□□□ 0.99
TPM4P67936 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM4P67936 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC21.23■□□□□ 0.99
TPM4P67936 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TPM4P67936 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TPM4P67936 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TPM4P67936 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.23■□□□□ 0.99
TPM4P67936 NOC2LP1-202ENST00000452600 2235 ntBASIC21.23■□□□□ 0.99
TPM4P67936 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TPM4P67936 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TPM4P67936 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TPM4P67936 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM4P67936 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TPM4P67936 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM4P67936 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.22■□□□□ 0.99
TPM4P67936 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.22■□□□□ 0.99
TPM4P67936 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.22■□□□□ 0.99
TPM4P67936 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.22■□□□□ 0.99
TPM4P67936 RPS2P52-201ENST00000469610 820 ntBASIC21.22■□□□□ 0.99
TPM4P67936 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.22■□□□□ 0.99
TPM4P67936 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TPM4P67936 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TPM4P67936 MKRN4P-201ENST00000444706 1521 ntBASIC21.22■□□□□ 0.99
TPM4P67936 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.22■□□□□ 0.99
TPM4P67936 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TPM4P67936 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM4P67936 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
TPM4P67936 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TPM4P67936 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TPM4P67936 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TPM4P67936 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
TPM4P67936 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.21■□□□□ 0.99
TPM4P67936 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
TPM4P67936 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.21■□□□□ 0.99
TPM4P67936 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms