Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.42□□□□□ -0.26
RPL39P62891 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.42□□□□□ -0.26
RPL39P62891 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC13.42□□□□□ -0.26
RPL39P62891 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.42□□□□□ -0.26
RPL39P62891 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.42□□□□□ -0.26
RPL39P62891 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.42□□□□□ -0.26
RPL39P62891 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL39P62891 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.42□□□□□ -0.26
RPL39P62891 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL39P62891 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RPL39P62891 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL39P62891 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RPL39P62891 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.42□□□□□ -0.26
RPL39P62891 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.42□□□□□ -0.26
RPL39P62891 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RPL39P62891 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.41□□□□□ -0.26
RPL39P62891 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.41□□□□□ -0.26
RPL39P62891 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
RPL39P62891 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.41□□□□□ -0.26
RPL39P62891 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.41□□□□□ -0.26
RPL39P62891 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.41□□□□□ -0.26
RPL39P62891 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC13.41□□□□□ -0.26
RPL39P62891 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RPL39P62891 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.41□□□□□ -0.26
RPL39P62891 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 CNN2P6-201ENST00000439038 900 ntBASIC13.41□□□□□ -0.26
RPL39P62891 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.41□□□□□ -0.26
RPL39P62891 AC069236.1-201ENST00000604339 616 ntBASIC13.41□□□□□ -0.26
RPL39P62891 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.41□□□□□ -0.26
RPL39P62891 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.41□□□□□ -0.26
RPL39P62891 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.41□□□□□ -0.26
RPL39P62891 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.41□□□□□ -0.26
RPL39P62891 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RPL39P62891 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC13.41□□□□□ -0.26
RPL39P62891 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC13.41□□□□□ -0.26
RPL39P62891 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RPL39P62891 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RPL39P62891 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.4□□□□□ -0.26
RPL39P62891 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RPL39P62891 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC13.4□□□□□ -0.26
RPL39P62891 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RPL39P62891 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC13.4□□□□□ -0.26
RPL39P62891 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC13.4□□□□□ -0.26
RPL39P62891 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RPL39P62891 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RPL39P62891 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 STX7-201ENST00000367937 1090 ntTSL 5 BASIC13.4□□□□□ -0.26
RPL39P62891 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RPL39P62891 CYP2T1P-201ENST00000432607 1285 ntBASIC13.4□□□□□ -0.26
RPL39P62891 KRT18P11-201ENST00000435214 1283 ntBASIC13.4□□□□□ -0.26
RPL39P62891 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.4□□□□□ -0.26
RPL39P62891 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.4□□□□□ -0.26
RPL39P62891 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.4□□□□□ -0.26
RPL39P62891 AC008694.1-202ENST00000636953 945 ntBASIC13.4□□□□□ -0.26
RPL39P62891 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RPL39P62891 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RPL39P62891 AC126763.1-201ENST00000552015 2118 ntBASIC13.4□□□□□ -0.26
RPL39P62891 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RPL39P62891 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
RPL39P62891 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms