Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KRT8P20-201ENST00000423953 1409 ntBASIC16.59■□□□□ 0.25
SEC61A1P61619 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
SEC61A1P61619 AC009237.14-201ENST00000609975 1594 ntBASIC16.59■□□□□ 0.25
SEC61A1P61619 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.59■□□□□ 0.25
SEC61A1P61619 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SEC61A1P61619 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.58■□□□□ 0.25
SEC61A1P61619 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.58■□□□□ 0.25
SEC61A1P61619 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SEC61A1P61619 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.58■□□□□ 0.24
SEC61A1P61619 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SEC61A1P61619 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 HLA-G-202ENST00000376815 851 ntBASIC16.58■□□□□ 0.24
SEC61A1P61619 HLA-G-203ENST00000376818 1127 ntBASIC16.58■□□□□ 0.24
SEC61A1P61619 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 KRASP1-201ENST00000407852 552 ntBASIC16.58■□□□□ 0.24
SEC61A1P61619 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC16.58■□□□□ 0.24
SEC61A1P61619 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.58■□□□□ 0.24
SEC61A1P61619 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.58■□□□□ 0.24
SEC61A1P61619 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 KRT16P6-202ENST00000425692 1426 ntBASIC16.58■□□□□ 0.24
SEC61A1P61619 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.58■□□□□ 0.24
SEC61A1P61619 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.58■□□□□ 0.24
SEC61A1P61619 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
SEC61A1P61619 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SEC61A1P61619 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61A1P61619 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61A1P61619 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SEC61A1P61619 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.57■□□□□ 0.24
SEC61A1P61619 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.57■□□□□ 0.24
SEC61A1P61619 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.57■□□□□ 0.24
SEC61A1P61619 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.57■□□□□ 0.24
SEC61A1P61619 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61A1P61619 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SEC61A1P61619 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.57■□□□□ 0.24
SEC61A1P61619 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.57■□□□□ 0.24
SEC61A1P61619 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.57■□□□□ 0.24
SEC61A1P61619 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
SEC61A1P61619 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.57■□□□□ 0.24
SEC61A1P61619 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61A1P61619 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.57■□□□□ 0.24
SEC61A1P61619 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61A1P61619 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61A1P61619 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61A1P61619 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.57■□□□□ 0.24
SEC61A1P61619 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61A1P61619 RPS2P4-201ENST00000476944 856 ntBASIC16.57■□□□□ 0.24
SEC61A1P61619 AC008550.1-201ENST00000511500 884 ntBASIC16.57■□□□□ 0.24
SEC61A1P61619 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.57■□□□□ 0.24
SEC61A1P61619 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.57■□□□□ 0.24
SEC61A1P61619 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.57■□□□□ 0.24
SEC61A1P61619 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SEC61A1P61619 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SEC61A1P61619 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61A1P61619 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
SEC61A1P61619 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SEC61A1P61619 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61A1P61619 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.57■□□□□ 0.24
SEC61A1P61619 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.57■□□□□ 0.24
SEC61A1P61619 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SEC61A1P61619 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.57■□□□□ 0.24
SEC61A1P61619 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61A1P61619 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61A1P61619 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61A1P61619 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SEC61A1P61619 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61A1P61619 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61A1P61619 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61A1P61619 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.56■□□□□ 0.24
SEC61A1P61619 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.56■□□□□ 0.24
SEC61A1P61619 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.56■□□□□ 0.24
SEC61A1P61619 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC16.56■□□□□ 0.24
SEC61A1P61619 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61A1P61619 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.56■□□□□ 0.24
SEC61A1P61619 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.56■□□□□ 0.24
SEC61A1P61619 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC16.56■□□□□ 0.24
SEC61A1P61619 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SEC61A1P61619 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61A1P61619 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61A1P61619 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61A1P61619 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SEC61A1P61619 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.56■□□□□ 0.24
SEC61A1P61619 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms