Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D3P61077 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.5□□□□□ -0.25
UBE2D3P61077 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.5□□□□□ -0.25
UBE2D3P61077 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D3P61077 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
UBE2D3P61077 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC13.49□□□□□ -0.25
UBE2D3P61077 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
UBE2D3P61077 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC13.49□□□□□ -0.25
UBE2D3P61077 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
UBE2D3P61077 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 AC104581.1-202ENST00000635932 2618 ntBASIC13.49□□□□□ -0.25
UBE2D3P61077 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
UBE2D3P61077 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 FP475955.4-201ENST00000623131 1990 ntBASIC13.49□□□□□ -0.25
UBE2D3P61077 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
UBE2D3P61077 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UBE2D3P61077 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.49□□□□□ -0.25
UBE2D3P61077 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.49□□□□□ -0.25
UBE2D3P61077 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.49□□□□□ -0.25
UBE2D3P61077 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC13.49□□□□□ -0.25
UBE2D3P61077 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.49□□□□□ -0.25
UBE2D3P61077 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.49□□□□□ -0.25
UBE2D3P61077 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.49□□□□□ -0.25
UBE2D3P61077 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.49□□□□□ -0.25
UBE2D3P61077 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UBE2D3P61077 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
UBE2D3P61077 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
UBE2D3P61077 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
UBE2D3P61077 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC13.48□□□□□ -0.25
UBE2D3P61077 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.48□□□□□ -0.25
UBE2D3P61077 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
UBE2D3P61077 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
UBE2D3P61077 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.48□□□□□ -0.25
UBE2D3P61077 UNC93B4-201ENST00000505679 747 ntBASIC13.48□□□□□ -0.25
UBE2D3P61077 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC13.48□□□□□ -0.25
UBE2D3P61077 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.48□□□□□ -0.25
UBE2D3P61077 AC142086.2-201ENST00000569753 217 ntBASIC13.48□□□□□ -0.25
UBE2D3P61077 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
UBE2D3P61077 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC13.48□□□□□ -0.25
UBE2D3P61077 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.48□□□□□ -0.25
UBE2D3P61077 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
UBE2D3P61077 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
UBE2D3P61077 AC068880.1-201ENST00000507289 2297 ntBASIC13.48□□□□□ -0.25
UBE2D3P61077 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.48□□□□□ -0.25
UBE2D3P61077 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
UBE2D3P61077 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
UBE2D3P61077 IRX1P1-201ENST00000438849 1838 ntBASIC13.48□□□□□ -0.25
UBE2D3P61077 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC13.48□□□□□ -0.25
UBE2D3P61077 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms