Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 AP001330.3-201ENST00000520123 633 ntBASIC16.3■□□□□ 0.2
AP3S2P59780 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
AP3S2P59780 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC16.3■□□□□ 0.2
AP3S2P59780 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.3■□□□□ 0.2
AP3S2P59780 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
AP3S2P59780 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
AP3S2P59780 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
AP3S2P59780 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3S2P59780 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
AP3S2P59780 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
AP3S2P59780 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.29■□□□□ 0.2
AP3S2P59780 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.29■□□□□ 0.2
AP3S2P59780 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3S2P59780 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3S2P59780 TRIR-205ENST00000592273 783 ntTSL 3 BASIC16.29■□□□□ 0.2
AP3S2P59780 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
AP3S2P59780 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.29■□□□□ 0.2
AP3S2P59780 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S2P59780 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
AP3S2P59780 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
AP3S2P59780 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
AP3S2P59780 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.28■□□□□ 0.2
AP3S2P59780 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3S2P59780 FEM1AP3-201ENST00000403722 1741 ntBASIC16.28■□□□□ 0.2
AP3S2P59780 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.28■□□□□ 0.2
AP3S2P59780 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3S2P59780 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.28■□□□□ 0.2
AP3S2P59780 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 EDA-201ENST00000338901 1233 ntBASIC16.28■□□□□ 0.2
AP3S2P59780 NME4-202ENST00000382940 766 ntTSL 3 BASIC16.28■□□□□ 0.2
AP3S2P59780 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 AC091305.1-201ENST00000479476 895 ntBASIC16.28■□□□□ 0.2
AP3S2P59780 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.28■□□□□ 0.2
AP3S2P59780 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.28■□□□□ 0.2
AP3S2P59780 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3S2P59780 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3S2P59780 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3S2P59780 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 AC116351.2-201ENST00000606540 1585 ntBASIC16.28■□□□□ 0.2
AP3S2P59780 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP3S2P59780 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.28■□□□□ 0.2
AP3S2P59780 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
AP3S2P59780 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S2P59780 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3S2P59780 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S2P59780 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S2P59780 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S2P59780 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S2P59780 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC16.27■□□□□ 0.2
AP3S2P59780 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.27■□□□□ 0.2
AP3S2P59780 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC16.27■□□□□ 0.2
AP3S2P59780 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms