Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.61■□□□□ 0.57
PKNOX1P55347 AC104771.1-201ENST00000603335 964 ntBASIC18.61■□□□□ 0.57
PKNOX1P55347 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKNOX1P55347 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKNOX1P55347 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKNOX1P55347 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKNOX1P55347 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKNOX1P55347 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKNOX1P55347 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PKNOX1P55347 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.6■□□□□ 0.57
PKNOX1P55347 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PKNOX1P55347 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKNOX1P55347 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PKNOX1P55347 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKNOX1P55347 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PKNOX1P55347 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKNOX1P55347 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PKNOX1P55347 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.6■□□□□ 0.57
PKNOX1P55347 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PKNOX1P55347 POM121L13P-201ENST00000422362 380 ntBASIC18.6■□□□□ 0.57
PKNOX1P55347 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.6■□□□□ 0.57
PKNOX1P55347 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.6■□□□□ 0.57
PKNOX1P55347 PRKY-204ENST00000533551 1019 ntBASIC18.6■□□□□ 0.57
PKNOX1P55347 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PKNOX1P55347 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKNOX1P55347 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.6■□□□□ 0.57
PKNOX1P55347 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PKNOX1P55347 AL031598.1-201ENST00000561511 1773 ntBASIC18.6■□□□□ 0.57
PKNOX1P55347 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKNOX1P55347 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PKNOX1P55347 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKNOX1P55347 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PKNOX1P55347 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PKNOX1P55347 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKNOX1P55347 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKNOX1P55347 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.59■□□□□ 0.57
PKNOX1P55347 AC079598.2-202ENST00000546624 1451 ntBASIC18.59■□□□□ 0.57
PKNOX1P55347 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKNOX1P55347 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PKNOX1P55347 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18.59■□□□□ 0.57
PKNOX1P55347 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKNOX1P55347 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.59■□□□□ 0.57
PKNOX1P55347 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.59■□□□□ 0.57
PKNOX1P55347 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
PKNOX1P55347 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PKNOX1P55347 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKNOX1P55347 Z98044.1-201ENST00000632503 1764 ntBASIC18.59■□□□□ 0.57
PKNOX1P55347 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.59■□□□□ 0.57
PKNOX1P55347 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKNOX1P55347 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKNOX1P55347 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.59■□□□□ 0.57
PKNOX1P55347 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.59■□□□□ 0.57
PKNOX1P55347 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PKNOX1P55347 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.59■□□□□ 0.57
PKNOX1P55347 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKNOX1P55347 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PKNOX1P55347 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.59■□□□□ 0.57
PKNOX1P55347 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.59■□□□□ 0.57
PKNOX1P55347 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKNOX1P55347 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PKNOX1P55347 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKNOX1P55347 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKNOX1P55347 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKNOX1P55347 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PKNOX1P55347 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PKNOX1P55347 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PKNOX1P55347 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.58■□□□□ 0.57
PKNOX1P55347 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.58■□□□□ 0.57
PKNOX1P55347 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PKNOX1P55347 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PKNOX1P55347 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PKNOX1P55347 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PKNOX1P55347 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PKNOX1P55347 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PKNOX1P55347 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PKNOX1P55347 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.58■□□□□ 0.56
PKNOX1P55347 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.58■□□□□ 0.56
PKNOX1P55347 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PKNOX1P55347 UNC93B5-201ENST00000530315 699 ntBASIC18.58■□□□□ 0.56
PKNOX1P55347 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.58■□□□□ 0.56
PKNOX1P55347 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PKNOX1P55347 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PKNOX1P55347 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PKNOX1P55347 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
PKNOX1P55347 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKNOX1P55347 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PKNOX1P55347 AC090340.1-201ENST00000620778 4980 ntBASIC18.57■□□□□ 0.56
PKNOX1P55347 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PKNOX1P55347 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PKNOX1P55347 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKNOX1P55347 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PKNOX1P55347 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
PKNOX1P55347 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.57■□□□□ 0.56
PKNOX1P55347 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PKNOX1P55347 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PKNOX1P55347 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.57■□□□□ 0.56
PKNOX1P55347 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PKNOX1P55347 TSPY21P-201ENST00000433481 731 ntBASIC18.57■□□□□ 0.56
PKNOX1P55347 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.57■□□□□ 0.56
PKNOX1P55347 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms