Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC080038.1-201ENST00000611274 1154 ntBASIC16.7■□□□□ 0.26
SOX2P48431 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX2P48431 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX2P48431 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.7■□□□□ 0.26
SOX2P48431 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.7■□□□□ 0.26
SOX2P48431 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.7■□□□□ 0.26
SOX2P48431 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
SOX2P48431 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SOX2P48431 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SOX2P48431 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SOX2P48431 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX2P48431 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SOX2P48431 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SOX2P48431 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.69■□□□□ 0.26
SOX2P48431 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SOX2P48431 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
SOX2P48431 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
SOX2P48431 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.69■□□□□ 0.26
SOX2P48431 DUSP5P2-201ENST00000426873 1033 ntBASIC16.69■□□□□ 0.26
SOX2P48431 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.69■□□□□ 0.26
SOX2P48431 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.69■□□□□ 0.26
SOX2P48431 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.69■□□□□ 0.26
SOX2P48431 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 AC073111.5-205ENST00000641717 521 ntBASIC16.69■□□□□ 0.26
SOX2P48431 FZD10-202ENST00000539839 3282 ntBASIC16.69■□□□□ 0.26
SOX2P48431 FEM1AP3-201ENST00000403722 1741 ntBASIC16.69■□□□□ 0.26
SOX2P48431 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.69■□□□□ 0.26
SOX2P48431 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.69■□□□□ 0.26
SOX2P48431 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SOX2P48431 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.69■□□□□ 0.26
SOX2P48431 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SOX2P48431 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SOX2P48431 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 BICD1-207ENST00000551848 1962 ntBASIC16.68■□□□□ 0.26
SOX2P48431 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SOX2P48431 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.68■□□□□ 0.26
SOX2P48431 MIR663A-201ENST00000385250 93 ntBASIC16.68■□□□□ 0.26
SOX2P48431 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SOX2P48431 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.68■□□□□ 0.26
SOX2P48431 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.68■□□□□ 0.26
SOX2P48431 RAP2CP1-201ENST00000605103 478 ntBASIC16.68■□□□□ 0.26
SOX2P48431 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SOX2P48431 AL121906.2-201ENST00000621597 723 ntBASIC16.68■□□□□ 0.26
SOX2P48431 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.68■□□□□ 0.26
SOX2P48431 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.68■□□□□ 0.26
SOX2P48431 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.68■□□□□ 0.26
SOX2P48431 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.68■□□□□ 0.26
SOX2P48431 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SOX2P48431 ANO7L1-203ENST00000602586 1720 ntBASIC16.67■□□□□ 0.26
SOX2P48431 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.67■□□□□ 0.26
SOX2P48431 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.67■□□□□ 0.26
SOX2P48431 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.67■□□□□ 0.26
SOX2P48431 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.67■□□□□ 0.26
SOX2P48431 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SOX2P48431 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SOX2P48431 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SOX2P48431 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms