Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC6A12P48065 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A12P48065 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A12P48065 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A12P48065 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A12P48065 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.31■□□□□ 0.52
SLC6A12P48065 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A12P48065 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A12P48065 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC6A12P48065 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.31■□□□□ 0.52
SLC6A12P48065 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.31■□□□□ 0.52
SLC6A12P48065 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A12P48065 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SLC6A12P48065 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A12P48065 ANO7L1-203ENST00000602586 1720 ntBASIC18.31■□□□□ 0.52
SLC6A12P48065 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A12P48065 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A12P48065 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A12P48065 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.31■□□□□ 0.52
SLC6A12P48065 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A12P48065 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A12P48065 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A12P48065 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SLC6A12P48065 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.31■□□□□ 0.52
SLC6A12P48065 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC6A12P48065 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC6A12P48065 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC6A12P48065 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.3■□□□□ 0.52
SLC6A12P48065 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC6A12P48065 AC008550.1-201ENST00000511500 884 ntBASIC18.3■□□□□ 0.52
SLC6A12P48065 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC6A12P48065 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC6A12P48065 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.3■□□□□ 0.52
SLC6A12P48065 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SLC6A12P48065 REXO1L10P-201ENST00000615707 1290 ntBASIC18.3■□□□□ 0.52
SLC6A12P48065 REXO1L12P-201ENST00000622156 912 ntBASIC18.3■□□□□ 0.52
SLC6A12P48065 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SLC6A12P48065 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.3■□□□□ 0.52
SLC6A12P48065 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SLC6A12P48065 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SLC6A12P48065 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.3■□□□□ 0.52
SLC6A12P48065 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SLC6A12P48065 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SLC6A12P48065 MTMR9LP-203ENST00000426597 1545 ntBASIC18.29■□□□□ 0.52
SLC6A12P48065 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A12P48065 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC6A12P48065 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A12P48065 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A12P48065 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A12P48065 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A12P48065 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A12P48065 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A12P48065 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.29■□□□□ 0.52
SLC6A12P48065 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A12P48065 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
SLC6A12P48065 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A12P48065 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.29■□□□□ 0.52
SLC6A12P48065 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SLC6A12P48065 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.29■□□□□ 0.52
SLC6A12P48065 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.28■□□□□ 0.52
SLC6A12P48065 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC6A12P48065 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SLC6A12P48065 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC6A12P48065 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SLC6A12P48065 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SLC6A12P48065 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A12P48065 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A12P48065 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A12P48065 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
SLC6A12P48065 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC6A12P48065 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.28■□□□□ 0.52
SLC6A12P48065 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.28■□□□□ 0.52
SLC6A12P48065 AC026471.5-201ENST00000615068 467 ntBASIC18.28■□□□□ 0.52
SLC6A12P48065 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.28■□□□□ 0.52
SLC6A12P48065 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A12P48065 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SLC6A12P48065 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
SLC6A12P48065 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC6A12P48065 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SLC6A12P48065 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A12P48065 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SLC6A12P48065 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.28■□□□□ 0.52
SLC6A12P48065 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.28■□□□□ 0.52
SLC6A12P48065 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms