Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC24.16■■□□□ 1.46
ATP6V1AP38606 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC24.16■■□□□ 1.46
ATP6V1AP38606 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
ATP6V1AP38606 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC24.16■■□□□ 1.46
ATP6V1AP38606 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC24.16■■□□□ 1.46
ATP6V1AP38606 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC24.16■■□□□ 1.46
ATP6V1AP38606 KRT18P31-201ENST00000506277 1292 ntBASIC24.16■■□□□ 1.46
ATP6V1AP38606 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
ATP6V1AP38606 AC012615.1-201ENST00000565797 1299 ntBASIC24.16■■□□□ 1.46
ATP6V1AP38606 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC24.16■■□□□ 1.46
ATP6V1AP38606 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
ATP6V1AP38606 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
ATP6V1AP38606 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
ATP6V1AP38606 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC24.16■■□□□ 1.46
ATP6V1AP38606 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC24.15■■□□□ 1.46
ATP6V1AP38606 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC24.15■■□□□ 1.46
ATP6V1AP38606 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC24.15■■□□□ 1.46
ATP6V1AP38606 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
ATP6V1AP38606 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC24.15■■□□□ 1.46
ATP6V1AP38606 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC24.15■■□□□ 1.46
ATP6V1AP38606 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC24.15■■□□□ 1.46
ATP6V1AP38606 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
ATP6V1AP38606 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC24.15■■□□□ 1.46
ATP6V1AP38606 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC24.15■■□□□ 1.46
ATP6V1AP38606 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
ATP6V1AP38606 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
ATP6V1AP38606 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC24.14■■□□□ 1.46
ATP6V1AP38606 Z83836.1-201ENST00000624605 1642 ntBASIC24.14■■□□□ 1.46
ATP6V1AP38606 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
ATP6V1AP38606 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ATP6V1AP38606 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ATP6V1AP38606 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC24.14■■□□□ 1.45
ATP6V1AP38606 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC24.14■■□□□ 1.45
ATP6V1AP38606 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ATP6V1AP38606 AL022342.1-201ENST00000400363 863 ntBASIC24.14■■□□□ 1.45
ATP6V1AP38606 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC24.14■■□□□ 1.45
ATP6V1AP38606 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC24.14■■□□□ 1.45
ATP6V1AP38606 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC24.14■■□□□ 1.45
ATP6V1AP38606 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
ATP6V1AP38606 LITAF-220ENST00000620789 692 ntTSL 5 BASIC24.14■■□□□ 1.45
ATP6V1AP38606 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
ATP6V1AP38606 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
ATP6V1AP38606 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
ATP6V1AP38606 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
ATP6V1AP38606 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
ATP6V1AP38606 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC24.14■■□□□ 1.45
ATP6V1AP38606 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V1AP38606 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC24.13■■□□□ 1.45
ATP6V1AP38606 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC24.13■■□□□ 1.45
ATP6V1AP38606 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V1AP38606 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V1AP38606 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V1AP38606 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V1AP38606 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC24.13■■□□□ 1.45
ATP6V1AP38606 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC24.13■■□□□ 1.45
ATP6V1AP38606 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC24.13■■□□□ 1.45
ATP6V1AP38606 LINC01711-201ENST00000598340 967 ntBASIC24.13■■□□□ 1.45
ATP6V1AP38606 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V1AP38606 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V1AP38606 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
ATP6V1AP38606 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
ATP6V1AP38606 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
ATP6V1AP38606 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
ATP6V1AP38606 UBC-206ENST00000538617 1303 ntTSL 5 BASIC24.12■■□□□ 1.45
ATP6V1AP38606 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC24.12■■□□□ 1.45
ATP6V1AP38606 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V1AP38606 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC24.12■■□□□ 1.45
ATP6V1AP38606 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V1AP38606 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V1AP38606 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V1AP38606 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V1AP38606 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V1AP38606 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC24.12■■□□□ 1.45
ATP6V1AP38606 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
ATP6V1AP38606 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC24.12■■□□□ 1.45
ATP6V1AP38606 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC24.12■■□□□ 1.45
ATP6V1AP38606 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC24.12■■□□□ 1.45
ATP6V1AP38606 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V1AP38606 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
ATP6V1AP38606 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V1AP38606 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V1AP38606 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
ATP6V1AP38606 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V1AP38606 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V1AP38606 MED17-221ENST00000639724 2317 ntTSL 5 BASIC24.11■■□□□ 1.45
ATP6V1AP38606 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
ATP6V1AP38606 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms