Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC12P31275 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.84■□□□□ 0.29
HOXC12P31275 AC010203.1-204ENST00000548782 407 ntBASIC16.84■□□□□ 0.29
HOXC12P31275 SLC25A1P4-201ENST00000567977 778 ntBASIC16.84■□□□□ 0.29
HOXC12P31275 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC12P31275 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC12P31275 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC12P31275 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HOXC12P31275 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC12P31275 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HOXC12P31275 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HOXC12P31275 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.84■□□□□ 0.29
HOXC12P31275 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC12P31275 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.84■□□□□ 0.29
HOXC12P31275 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC12P31275 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC12P31275 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC12P31275 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC12P31275 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC12P31275 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC12P31275 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC12P31275 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC12P31275 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HOXC12P31275 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HOXC12P31275 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOXC12P31275 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOXC12P31275 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.29
HOXC12P31275 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
HOXC12P31275 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC12P31275 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC12P31275 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC12P31275 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC12P31275 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC12P31275 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC12P31275 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC12P31275 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HOXC12P31275 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC12P31275 LIN28AP1-201ENST00000429574 405 ntBASIC16.83■□□□□ 0.28
HOXC12P31275 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXC12P31275 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HOXC12P31275 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC12P31275 Z85996.1-201ENST00000494644 937 ntBASIC16.83■□□□□ 0.28
HOXC12P31275 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC12P31275 AC097488.1-201ENST00000507834 756 ntBASIC16.83■□□□□ 0.28
HOXC12P31275 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HOXC12P31275 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC12P31275 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXC12P31275 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC12P31275 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC12P31275 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXC12P31275 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.83■□□□□ 0.28
HOXC12P31275 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.83■□□□□ 0.28
HOXC12P31275 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.83■□□□□ 0.28
HOXC12P31275 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC12P31275 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC12P31275 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HOXC12P31275 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC12P31275 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HOXC12P31275 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXC12P31275 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HOXC12P31275 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXC12P31275 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC12P31275 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXC12P31275 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HOXC12P31275 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC12P31275 CRYGFP-201ENST00000418459 633 ntBASIC16.82■□□□□ 0.28
HOXC12P31275 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXC12P31275 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXC12P31275 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.82■□□□□ 0.28
HOXC12P31275 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.82■□□□□ 0.28
HOXC12P31275 C2orf69P3-201ENST00000565542 1120 ntBASIC16.82■□□□□ 0.28
HOXC12P31275 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HOXC12P31275 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXC12P31275 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HOXC12P31275 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
HOXC12P31275 AC006011.2-201ENST00000621313 1158 ntBASIC16.82■□□□□ 0.28
HOXC12P31275 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC12P31275 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
HOXC12P31275 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.82■□□□□ 0.28
HOXC12P31275 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HOXC12P31275 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.82■□□□□ 0.28
HOXC12P31275 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms