Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN6P29350 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN6P29350 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN6P29350 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN6P29350 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.01■□□□□ 0.47
PTPN6P29350 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PTPN6P29350 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PTPN6P29350 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PTPN6P29350 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PTPN6P29350 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN6P29350 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.01■□□□□ 0.47
PTPN6P29350 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTPN6P29350 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
PTPN6P29350 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18■□□□□ 0.47
PTPN6P29350 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
PTPN6P29350 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18■□□□□ 0.47
PTPN6P29350 AL390961.4-201ENST00000623958 2535 ntBASIC18■□□□□ 0.47
PTPN6P29350 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18■□□□□ 0.47
PTPN6P29350 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18■□□□□ 0.47
PTPN6P29350 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18■□□□□ 0.47
PTPN6P29350 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18■□□□□ 0.47
PTPN6P29350 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18■□□□□ 0.47
PTPN6P29350 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PTPN6P29350 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18■□□□□ 0.47
PTPN6P29350 USP36-216ENST00000589424 970 ntTSL 5 BASIC18■□□□□ 0.47
PTPN6P29350 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18■□□□□ 0.47
PTPN6P29350 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PTPN6P29350 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 ANO7L1-203ENST00000602586 1720 ntBASIC18■□□□□ 0.47
PTPN6P29350 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18■□□□□ 0.47
PTPN6P29350 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18■□□□□ 0.47
PTPN6P29350 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PTPN6P29350 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.99■□□□□ 0.47
PTPN6P29350 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.99■□□□□ 0.47
PTPN6P29350 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.99■□□□□ 0.47
PTPN6P29350 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.99■□□□□ 0.47
PTPN6P29350 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PTPN6P29350 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN6P29350 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN6P29350 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.99■□□□□ 0.47
PTPN6P29350 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
PTPN6P29350 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PTPN6P29350 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.99■□□□□ 0.47
PTPN6P29350 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN6P29350 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN6P29350 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN6P29350 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN6P29350 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN6P29350 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.99■□□□□ 0.47
PTPN6P29350 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN6P29350 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.99■□□□□ 0.47
PTPN6P29350 AC093827.2-201ENST00000512654 315 ntBASIC17.99■□□□□ 0.47
PTPN6P29350 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.99■□□□□ 0.47
PTPN6P29350 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN6P29350 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.99■□□□□ 0.47
PTPN6P29350 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
PTPN6P29350 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.99■□□□□ 0.47
PTPN6P29350 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PTPN6P29350 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.99■□□□□ 0.47
PTPN6P29350 NBPF21P-201ENST00000425093 1451 ntBASIC17.99■□□□□ 0.47
PTPN6P29350 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PTPN6P29350 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN6P29350 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN6P29350 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN6P29350 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.99■□□□□ 0.47
PTPN6P29350 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PTPN6P29350 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PTPN6P29350 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN6P29350 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.98■□□□□ 0.47
PTPN6P29350 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.98■□□□□ 0.47
PTPN6P29350 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN6P29350 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.98■□□□□ 0.47
PTPN6P29350 HLA-A-209ENST00000638375 975 ntBASIC17.98■□□□□ 0.47
PTPN6P29350 AC079598.2-202ENST00000546624 1451 ntBASIC17.98■□□□□ 0.47
PTPN6P29350 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN6P29350 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
PTPN6P29350 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms