Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.37■□□□□ 0.21
CD40P25942 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
CD40P25942 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CD40P25942 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CD40P25942 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CD40P25942 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CD40P25942 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC16.37■□□□□ 0.21
CD40P25942 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.37■□□□□ 0.21
CD40P25942 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.36■□□□□ 0.21
CD40P25942 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.36■□□□□ 0.21
CD40P25942 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.36■□□□□ 0.21
CD40P25942 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CD40P25942 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 AP000523.1-201ENST00000398242 1049 ntBASIC16.36■□□□□ 0.21
CD40P25942 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.36■□□□□ 0.21
CD40P25942 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 AC011558.1-201ENST00000623459 338 ntBASIC16.36■□□□□ 0.21
CD40P25942 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CD40P25942 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.36■□□□□ 0.21
CD40P25942 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
CD40P25942 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.36■□□□□ 0.21
CD40P25942 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
CD40P25942 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.36■□□□□ 0.21
CD40P25942 KRT8P3-201ENST00000519669 1449 ntBASIC16.36■□□□□ 0.21
CD40P25942 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CD40P25942 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.36■□□□□ 0.21
CD40P25942 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.35■□□□□ 0.21
CD40P25942 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.35■□□□□ 0.21
CD40P25942 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.35■□□□□ 0.21
CD40P25942 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.35■□□□□ 0.21
CD40P25942 AC092647.4-201ENST00000457211 535 ntBASIC16.35■□□□□ 0.21
CD40P25942 AC087388.1-201ENST00000571370 1112 ntBASIC16.35■□□□□ 0.21
CD40P25942 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.35■□□□□ 0.21
CD40P25942 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CD40P25942 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
CD40P25942 AC073130.3-201ENST00000624389 2278 ntBASIC16.35■□□□□ 0.21
CD40P25942 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CD40P25942 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.35■□□□□ 0.21
CD40P25942 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.35■□□□□ 0.21
CD40P25942 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CD40P25942 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD40P25942 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.34■□□□□ 0.21
CD40P25942 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD40P25942 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD40P25942 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD40P25942 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CD40P25942 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD40P25942 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.34■□□□□ 0.21
CD40P25942 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD40P25942 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD40P25942 AC009947.2-201ENST00000444014 672 ntBASIC16.34■□□□□ 0.21
CD40P25942 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD40P25942 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.34■□□□□ 0.21
CD40P25942 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16.34■□□□□ 0.21
CD40P25942 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.34■□□□□ 0.21
CD40P25942 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.34■□□□□ 0.21
CD40P25942 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.34■□□□□ 0.21
CD40P25942 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.34■□□□□ 0.21
CD40P25942 AL023973.1-201ENST00000624619 620 ntBASIC16.34■□□□□ 0.21
CD40P25942 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD40P25942 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.34■□□□□ 0.21
CD40P25942 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.34■□□□□ 0.21
CD40P25942 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CD40P25942 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CD40P25942 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms