Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KRT3P12035 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.99■□□□□ 0.79
KRT3P12035 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT3P12035 CROCCP3-202ENST00000420820 1947 ntBASIC19.98■□□□□ 0.79
KRT3P12035 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
KRT3P12035 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT3P12035 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT3P12035 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT3P12035 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT3P12035 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT3P12035 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
KRT3P12035 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT3P12035 AC012618.2-201ENST00000428058 849 ntBASIC19.98■□□□□ 0.79
KRT3P12035 AC008040.2-201ENST00000461049 708 ntBASIC19.98■□□□□ 0.79
KRT3P12035 B3GAT3P1-201ENST00000471720 806 ntBASIC19.98■□□□□ 0.79
KRT3P12035 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KRT3P12035 PRSS44-201ENST00000515154 1146 ntBASIC19.98■□□□□ 0.79
KRT3P12035 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.98■□□□□ 0.79
KRT3P12035 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT3P12035 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT3P12035 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
KRT3P12035 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
KRT3P12035 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KRT3P12035 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT3P12035 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.97■□□□□ 0.79
KRT3P12035 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.97■□□□□ 0.79
KRT3P12035 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT3P12035 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.97■□□□□ 0.79
KRT3P12035 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
KRT3P12035 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
KRT3P12035 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.97■□□□□ 0.79
KRT3P12035 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.97■□□□□ 0.79
KRT3P12035 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT3P12035 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.97■□□□□ 0.79
KRT3P12035 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.97■□□□□ 0.79
KRT3P12035 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
KRT3P12035 FSCN1P1-201ENST00000568912 1481 ntBASIC19.97■□□□□ 0.79
KRT3P12035 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
KRT3P12035 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 AL020996.1-203ENST00000536896 2307 ntBASIC19.97■□□□□ 0.79
KRT3P12035 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
KRT3P12035 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
KRT3P12035 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
KRT3P12035 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
KRT3P12035 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT3P12035 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
KRT3P12035 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT3P12035 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT3P12035 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT3P12035 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
KRT3P12035 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT3P12035 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT3P12035 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT3P12035 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.96■□□□□ 0.79
KRT3P12035 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
KRT3P12035 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.96■□□□□ 0.79
KRT3P12035 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.96■□□□□ 0.79
KRT3P12035 Z99916.2-201ENST00000604037 246 ntBASIC19.96■□□□□ 0.79
KRT3P12035 AC113410.3-201ENST00000623366 203 ntBASIC19.96■□□□□ 0.79
KRT3P12035 AL049637.2-201ENST00000641778 930 ntBASIC19.96■□□□□ 0.79
KRT3P12035 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
KRT3P12035 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.96■□□□□ 0.79
KRT3P12035 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.96■□□□□ 0.79
KRT3P12035 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT3P12035 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
KRT3P12035 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT3P12035 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
KRT3P12035 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
KRT3P12035 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
KRT3P12035 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT3P12035 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
KRT3P12035 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT3P12035 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT3P12035 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT3P12035 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
KRT3P12035 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
KRT3P12035 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.95■□□□□ 0.78
KRT3P12035 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.95■□□□□ 0.78
KRT3P12035 MESTP1-201ENST00000404287 994 ntBASIC19.95■□□□□ 0.78
KRT3P12035 FAM207BP-201ENST00000447172 505 ntBASIC19.95■□□□□ 0.78
KRT3P12035 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.95■□□□□ 0.78
KRT3P12035 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms