Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
RAB40ALP0C0E4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RAB40ALP0C0E4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 TSPY23P-201ENST00000440136 739 ntBASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.87■□□□□ 0.45
RAB40ALP0C0E4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 AC112907.3-201ENST00000577781 2400 ntBASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 AP000550.4-202ENST00000639755 178 ntBASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RAB40ALP0C0E4 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 UPK3BP1-201ENST00000428678 509 ntBASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 AC009947.2-201ENST00000444014 672 ntBASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 AL671277.2-201ENST00000458060 996 ntBASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.85■□□□□ 0.45
RAB40ALP0C0E4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms