Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.31■□□□□ 0.36
HTR1AP08908 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.31■□□□□ 0.36
HTR1AP08908 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HTR1AP08908 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.31■□□□□ 0.36
HTR1AP08908 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
HTR1AP08908 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.31■□□□□ 0.36
HTR1AP08908 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
HTR1AP08908 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.31■□□□□ 0.36
HTR1AP08908 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.31■□□□□ 0.36
HTR1AP08908 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
HTR1AP08908 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.31■□□□□ 0.36
HTR1AP08908 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.31■□□□□ 0.36
HTR1AP08908 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
HTR1AP08908 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.31■□□□□ 0.36
HTR1AP08908 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
HTR1AP08908 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
HTR1AP08908 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
HTR1AP08908 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.3■□□□□ 0.36
HTR1AP08908 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HTR1AP08908 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HTR1AP08908 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.3■□□□□ 0.36
HTR1AP08908 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.3■□□□□ 0.36
HTR1AP08908 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HTR1AP08908 STX7-201ENST00000367937 1090 ntTSL 5 BASIC17.3■□□□□ 0.36
HTR1AP08908 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.3■□□□□ 0.36
HTR1AP08908 AC116351.2-201ENST00000606540 1585 ntBASIC17.3■□□□□ 0.36
HTR1AP08908 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.3■□□□□ 0.36
HTR1AP08908 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.3■□□□□ 0.36
HTR1AP08908 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
HTR1AP08908 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.3■□□□□ 0.36
HTR1AP08908 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.3■□□□□ 0.36
HTR1AP08908 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HTR1AP08908 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1AP08908 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1AP08908 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.29■□□□□ 0.36
HTR1AP08908 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.29■□□□□ 0.36
HTR1AP08908 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.29■□□□□ 0.36
HTR1AP08908 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HTR1AP08908 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1AP08908 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1AP08908 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1AP08908 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.29■□□□□ 0.36
HTR1AP08908 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.29■□□□□ 0.36
HTR1AP08908 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1AP08908 AC034268.1-201ENST00000441047 882 ntBASIC17.29■□□□□ 0.36
HTR1AP08908 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1AP08908 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.29■□□□□ 0.36
HTR1AP08908 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.29■□□□□ 0.36
HTR1AP08908 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.29■□□□□ 0.36
HTR1AP08908 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.29■□□□□ 0.36
HTR1AP08908 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
HTR1AP08908 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1AP08908 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HTR1AP08908 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
HTR1AP08908 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1AP08908 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1AP08908 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HTR1AP08908 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HTR1AP08908 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HTR1AP08908 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1AP08908 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HTR1AP08908 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms