Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.53■□□□□ 0.08
SCAF4O95104 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.53■□□□□ 0.08
SCAF4O95104 AL354751.1-201ENST00000412768 1863 ntBASIC15.53■□□□□ 0.08
SCAF4O95104 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
SCAF4O95104 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.53■□□□□ 0.08
SCAF4O95104 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCAF4O95104 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC15.53■□□□□ 0.08
SCAF4O95104 GPX1P1-201ENST00000388829 606 ntBASIC15.53■□□□□ 0.08
SCAF4O95104 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCAF4O95104 AF201337.1-201ENST00000520239 748 ntBASIC15.53■□□□□ 0.08
SCAF4O95104 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SCAF4O95104 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.53■□□□□ 0.08
SCAF4O95104 AL121832.2-201ENST00000610979 668 ntBASIC15.53■□□□□ 0.08
SCAF4O95104 AC105020.6-201ENST00000621523 1217 ntBASIC15.53■□□□□ 0.08
SCAF4O95104 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCAF4O95104 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCAF4O95104 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCAF4O95104 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
SCAF4O95104 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
SCAF4O95104 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCAF4O95104 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCAF4O95104 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCAF4O95104 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SCAF4O95104 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SCAF4O95104 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
SCAF4O95104 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.52■□□□□ 0.08
SCAF4O95104 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SCAF4O95104 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCAF4O95104 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SCAF4O95104 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.52■□□□□ 0.08
SCAF4O95104 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCAF4O95104 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC15.52■□□□□ 0.08
SCAF4O95104 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
SCAF4O95104 AC006333.2-201ENST00000607957 2099 ntBASIC15.52■□□□□ 0.08
SCAF4O95104 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SCAF4O95104 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
SCAF4O95104 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCAF4O95104 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCAF4O95104 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
SCAF4O95104 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCAF4O95104 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SCAF4O95104 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC15.52■□□□□ 0.08
SCAF4O95104 AC083906.2-201ENST00000511578 360 ntBASIC15.52■□□□□ 0.08
SCAF4O95104 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC15.52■□□□□ 0.08
SCAF4O95104 RARRES2P4-201ENST00000514074 484 ntBASIC15.52■□□□□ 0.08
SCAF4O95104 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
SCAF4O95104 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCAF4O95104 BICD1-207ENST00000551848 1962 ntBASIC15.52■□□□□ 0.07
SCAF4O95104 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SCAF4O95104 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCAF4O95104 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SCAF4O95104 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
SCAF4O95104 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SCAF4O95104 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
SCAF4O95104 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCAF4O95104 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.52■□□□□ 0.07
SCAF4O95104 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCAF4O95104 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.52■□□□□ 0.07
SCAF4O95104 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCAF4O95104 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.52■□□□□ 0.07
SCAF4O95104 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
SCAF4O95104 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.52■□□□□ 0.07
SCAF4O95104 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.52■□□□□ 0.07
SCAF4O95104 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCAF4O95104 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCAF4O95104 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
SCAF4O95104 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.51■□□□□ 0.07
SCAF4O95104 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
SCAF4O95104 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 HLA-L-209ENST00000420110 1011 ntBASIC15.51■□□□□ 0.07
SCAF4O95104 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.51■□□□□ 0.07
SCAF4O95104 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC15.51■□□□□ 0.07
SCAF4O95104 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.51■□□□□ 0.07
SCAF4O95104 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.51■□□□□ 0.07
SCAF4O95104 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.51■□□□□ 0.07
SCAF4O95104 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 AL109923.1-201ENST00000618799 583 ntBASIC15.51■□□□□ 0.07
SCAF4O95104 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.51■□□□□ 0.07
SCAF4O95104 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SCAF4O95104 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 AL031598.1-201ENST00000561511 1773 ntBASIC15.51■□□□□ 0.07
SCAF4O95104 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.51■□□□□ 0.07
SCAF4O95104 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
SCAF4O95104 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.51■□□□□ 0.07
SCAF4O95104 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
SCAF4O95104 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
SCAF4O95104 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms