Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KRT33AO76009 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
KRT33AO76009 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KRT33AO76009 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
KRT33AO76009 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.21■□□□□ 0.35
KRT33AO76009 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.21■□□□□ 0.35
KRT33AO76009 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
KRT33AO76009 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.21■□□□□ 0.35
KRT33AO76009 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.21■□□□□ 0.35
KRT33AO76009 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
KRT33AO76009 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
KRT33AO76009 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KRT33AO76009 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
KRT33AO76009 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT33AO76009 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT33AO76009 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
KRT33AO76009 MIR718-201ENST00000390190 70 ntBASIC17.2■□□□□ 0.34
KRT33AO76009 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
KRT33AO76009 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.2■□□□□ 0.34
KRT33AO76009 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT33AO76009 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT33AO76009 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.2■□□□□ 0.34
KRT33AO76009 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.2■□□□□ 0.34
KRT33AO76009 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.2■□□□□ 0.34
KRT33AO76009 AP001412.1-201ENST00000608405 714 ntBASIC17.2■□□□□ 0.34
KRT33AO76009 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT33AO76009 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.2■□□□□ 0.34
KRT33AO76009 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
KRT33AO76009 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.19■□□□□ 0.34
KRT33AO76009 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
KRT33AO76009 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT33AO76009 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
KRT33AO76009 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT33AO76009 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
KRT33AO76009 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
KRT33AO76009 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 RARRES2P10-201ENST00000564312 460 ntBASIC17.19■□□□□ 0.34
KRT33AO76009 C1QL1P1-201ENST00000568105 661 ntBASIC17.19■□□□□ 0.34
KRT33AO76009 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT33AO76009 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
KRT33AO76009 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.19■□□□□ 0.34
KRT33AO76009 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.19■□□□□ 0.34
KRT33AO76009 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT33AO76009 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
KRT33AO76009 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT33AO76009 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
KRT33AO76009 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.19■□□□□ 0.34
KRT33AO76009 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms