Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KLHL41O60662 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
KLHL41O60662 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 HCG11-201ENST00000411553 5696 ntBASIC18.82■□□□□ 0.6
KLHL41O60662 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.82■□□□□ 0.6
KLHL41O60662 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
KLHL41O60662 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.82■□□□□ 0.6
KLHL41O60662 AC012618.2-201ENST00000428058 849 ntBASIC18.82■□□□□ 0.6
KLHL41O60662 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.82■□□□□ 0.6
KLHL41O60662 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.82■□□□□ 0.6
KLHL41O60662 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.82■□□□□ 0.6
KLHL41O60662 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.82■□□□□ 0.6
KLHL41O60662 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
KLHL41O60662 AC005829.2-201ENST00000571422 1056 ntBASIC18.82■□□□□ 0.6
KLHL41O60662 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.82■□□□□ 0.6
KLHL41O60662 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.82■□□□□ 0.6
KLHL41O60662 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
KLHL41O60662 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
KLHL41O60662 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
KLHL41O60662 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
KLHL41O60662 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
KLHL41O60662 AC090164.3-201ENST00000610780 2143 ntBASIC18.82■□□□□ 0.6
KLHL41O60662 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL41O60662 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL41O60662 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL41O60662 KRT17P2-201ENST00000300992 1314 ntBASIC18.81■□□□□ 0.6
KLHL41O60662 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL41O60662 FP475955.4-201ENST00000623131 1990 ntBASIC18.81■□□□□ 0.6
KLHL41O60662 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KLHL41O60662 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL41O60662 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL41O60662 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.81■□□□□ 0.6
KLHL41O60662 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
KLHL41O60662 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL41O60662 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL41O60662 AC133681.1-201ENST00000465482 601 ntBASIC18.81■□□□□ 0.6
KLHL41O60662 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.81■□□□□ 0.6
KLHL41O60662 AC120498.8-201ENST00000614275 531 ntBASIC18.81■□□□□ 0.6
KLHL41O60662 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL41O60662 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
KLHL41O60662 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.81■□□□□ 0.6
KLHL41O60662 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.81■□□□□ 0.6
KLHL41O60662 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL41O60662 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
KLHL41O60662 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL41O60662 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL41O60662 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL41O60662 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KLHL41O60662 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL41O60662 AL031598.1-201ENST00000561511 1773 ntBASIC18.81■□□□□ 0.6
KLHL41O60662 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL41O60662 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL41O60662 AC116351.2-201ENST00000606540 1585 ntBASIC18.81■□□□□ 0.6
KLHL41O60662 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL41O60662 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.8■□□□□ 0.6
KLHL41O60662 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.8■□□□□ 0.6
KLHL41O60662 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 ZNF815P-204ENST00000434898 1737 ntBASIC18.8■□□□□ 0.6
KLHL41O60662 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KLHL41O60662 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
KLHL41O60662 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.8■□□□□ 0.6
KLHL41O60662 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
KLHL41O60662 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.8■□□□□ 0.6
KLHL41O60662 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
KLHL41O60662 PRKY-204ENST00000533551 1019 ntBASIC18.8■□□□□ 0.6
KLHL41O60662 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 AL133373.2-201ENST00000623187 2828 ntBASIC18.8■□□□□ 0.6
KLHL41O60662 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL41O60662 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
KLHL41O60662 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL41O60662 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL41O60662 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms