Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
URB1O60287 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
URB1O60287 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
URB1O60287 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
URB1O60287 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.9■□□□□ 0.46
URB1O60287 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
URB1O60287 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.9■□□□□ 0.46
URB1O60287 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.9■□□□□ 0.46
URB1O60287 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
URB1O60287 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.9■□□□□ 0.46
URB1O60287 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
URB1O60287 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
URB1O60287 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.9■□□□□ 0.46
URB1O60287 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
URB1O60287 AC093525.10-201ENST00000625130 1569 ntBASIC17.9■□□□□ 0.46
URB1O60287 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.9■□□□□ 0.46
URB1O60287 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
URB1O60287 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
URB1O60287 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.9■□□□□ 0.46
URB1O60287 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.9■□□□□ 0.46
URB1O60287 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
URB1O60287 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.89■□□□□ 0.46
URB1O60287 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
URB1O60287 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.89■□□□□ 0.46
URB1O60287 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
URB1O60287 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.89■□□□□ 0.46
URB1O60287 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC17.89■□□□□ 0.46
URB1O60287 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.89■□□□□ 0.46
URB1O60287 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
URB1O60287 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.89■□□□□ 0.46
URB1O60287 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC17.89■□□□□ 0.45
URB1O60287 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.89■□□□□ 0.45
URB1O60287 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.89■□□□□ 0.45
URB1O60287 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.89■□□□□ 0.45
URB1O60287 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.89■□□□□ 0.45
URB1O60287 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
URB1O60287 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
URB1O60287 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.89■□□□□ 0.45
URB1O60287 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
URB1O60287 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
URB1O60287 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.89■□□□□ 0.45
URB1O60287 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.89■□□□□ 0.45
URB1O60287 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.89■□□□□ 0.45
URB1O60287 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.89■□□□□ 0.45
URB1O60287 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
URB1O60287 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.89■□□□□ 0.45
URB1O60287 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
URB1O60287 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
URB1O60287 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
URB1O60287 RNA5SP419-201ENST00000515908 135 ntBASIC17.88■□□□□ 0.45
URB1O60287 LINC02084-201ENST00000606069 1096 ntBASIC17.88■□□□□ 0.45
URB1O60287 AC022898.2-201ENST00000616822 1312 ntBASIC17.88■□□□□ 0.45
URB1O60287 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
URB1O60287 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
URB1O60287 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
URB1O60287 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
URB1O60287 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
URB1O60287 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
URB1O60287 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
URB1O60287 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
URB1O60287 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.88■□□□□ 0.45
URB1O60287 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
URB1O60287 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.88■□□□□ 0.45
URB1O60287 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.88■□□□□ 0.45
URB1O60287 TOB2P1-201ENST00000469761 992 ntBASIC17.88■□□□□ 0.45
URB1O60287 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.88■□□□□ 0.45
URB1O60287 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.88■□□□□ 0.45
URB1O60287 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.88■□□□□ 0.45
URB1O60287 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
URB1O60287 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
URB1O60287 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.88■□□□□ 0.45
URB1O60287 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.87■□□□□ 0.45
URB1O60287 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
URB1O60287 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.87■□□□□ 0.45
URB1O60287 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
URB1O60287 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
URB1O60287 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
URB1O60287 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
URB1O60287 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.87■□□□□ 0.45
URB1O60287 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
URB1O60287 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.87■□□□□ 0.45
URB1O60287 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
URB1O60287 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.87■□□□□ 0.45
URB1O60287 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.87■□□□□ 0.45
URB1O60287 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
URB1O60287 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.87■□□□□ 0.45
URB1O60287 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms