Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.4■□□□□ 0.38
IDH3BO43837 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.4■□□□□ 0.38
IDH3BO43837 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.4■□□□□ 0.38
IDH3BO43837 MIR4758-201ENST00000577688 71 ntBASIC17.4■□□□□ 0.38
IDH3BO43837 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
IDH3BO43837 AC006557.6-201ENST00000623071 864 ntBASIC17.4■□□□□ 0.38
IDH3BO43837 HLA-B-256ENST00000639848 1089 ntBASIC17.4■□□□□ 0.38
IDH3BO43837 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IDH3BO43837 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
IDH3BO43837 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
IDH3BO43837 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IDH3BO43837 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IDH3BO43837 AP006587.1-201ENST00000534129 1502 ntBASIC17.4■□□□□ 0.38
IDH3BO43837 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IDH3BO43837 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.4■□□□□ 0.38
IDH3BO43837 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
IDH3BO43837 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IDH3BO43837 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
IDH3BO43837 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IDH3BO43837 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IDH3BO43837 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
IDH3BO43837 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
IDH3BO43837 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
IDH3BO43837 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.4■□□□□ 0.38
IDH3BO43837 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.38
IDH3BO43837 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.39■□□□□ 0.38
IDH3BO43837 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.39■□□□□ 0.38
IDH3BO43837 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
IDH3BO43837 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
IDH3BO43837 KRT8P8-201ENST00000434750 1448 ntBASIC17.39■□□□□ 0.38
IDH3BO43837 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.39■□□□□ 0.38
IDH3BO43837 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IDH3BO43837 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IDH3BO43837 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.39■□□□□ 0.37
IDH3BO43837 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
IDH3BO43837 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.39■□□□□ 0.37
IDH3BO43837 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.39■□□□□ 0.37
IDH3BO43837 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.39■□□□□ 0.37
IDH3BO43837 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.39■□□□□ 0.37
IDH3BO43837 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IDH3BO43837 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.39■□□□□ 0.37
IDH3BO43837 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
IDH3BO43837 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IDH3BO43837 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IDH3BO43837 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
IDH3BO43837 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.39■□□□□ 0.37
IDH3BO43837 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
IDH3BO43837 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
IDH3BO43837 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.39■□□□□ 0.37
IDH3BO43837 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IDH3BO43837 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
IDH3BO43837 TEX21P-204ENST00000641479 1693 ntBASIC17.39■□□□□ 0.37
IDH3BO43837 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
IDH3BO43837 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.38■□□□□ 0.37
IDH3BO43837 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IDH3BO43837 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IDH3BO43837 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IDH3BO43837 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
IDH3BO43837 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.38■□□□□ 0.37
IDH3BO43837 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IDH3BO43837 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IDH3BO43837 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
IDH3BO43837 AL161938.1-201ENST00000569833 2180 ntBASIC17.38■□□□□ 0.37
IDH3BO43837 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IDH3BO43837 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IDH3BO43837 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
IDH3BO43837 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IDH3BO43837 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.38■□□□□ 0.37
IDH3BO43837 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.38■□□□□ 0.37
IDH3BO43837 AC097658.1-201ENST00000475555 843 ntBASIC17.38■□□□□ 0.37
IDH3BO43837 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.38■□□□□ 0.37
IDH3BO43837 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
IDH3BO43837 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
IDH3BO43837 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.38■□□□□ 0.37
IDH3BO43837 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.38■□□□□ 0.37
IDH3BO43837 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
IDH3BO43837 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
IDH3BO43837 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.38■□□□□ 0.37
IDH3BO43837 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.38■□□□□ 0.37
IDH3BO43837 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
IDH3BO43837 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.37■□□□□ 0.37
IDH3BO43837 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.37■□□□□ 0.37
IDH3BO43837 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.37■□□□□ 0.37
IDH3BO43837 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
IDH3BO43837 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.37■□□□□ 0.37
IDH3BO43837 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.37■□□□□ 0.37
IDH3BO43837 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.37■□□□□ 0.37
IDH3BO43837 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.37■□□□□ 0.37
IDH3BO43837 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
IDH3BO43837 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.37■□□□□ 0.37
IDH3BO43837 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
IDH3BO43837 AC139713.2-201ENST00000641328 2723 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms