Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC004264.1-201ENST00000608354 794 ntBASIC18.89■□□□□ 0.61
PHGDHO43175 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.89■□□□□ 0.61
PHGDHO43175 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.89■□□□□ 0.61
PHGDHO43175 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHGDHO43175 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PHGDHO43175 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHGDHO43175 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PHGDHO43175 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.89■□□□□ 0.61
PHGDHO43175 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PHGDHO43175 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
PHGDHO43175 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PHGDHO43175 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.88■□□□□ 0.61
PHGDHO43175 ID1-201ENST00000376105 1233 ntBASIC18.88■□□□□ 0.61
PHGDHO43175 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 KRT17P3-201ENST00000420566 1262 ntBASIC18.88■□□□□ 0.61
PHGDHO43175 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.88■□□□□ 0.61
PHGDHO43175 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.88■□□□□ 0.61
PHGDHO43175 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.88■□□□□ 0.61
PHGDHO43175 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.88■□□□□ 0.61
PHGDHO43175 AL023875.1-201ENST00000640777 796 ntBASIC18.88■□□□□ 0.61
PHGDHO43175 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.88■□□□□ 0.61
PHGDHO43175 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.88■□□□□ 0.61
PHGDHO43175 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
PHGDHO43175 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.88■□□□□ 0.61
PHGDHO43175 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.88■□□□□ 0.61
PHGDHO43175 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PHGDHO43175 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHGDHO43175 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHGDHO43175 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.87■□□□□ 0.61
PHGDHO43175 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PHGDHO43175 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PHGDHO43175 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHGDHO43175 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHGDHO43175 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHGDHO43175 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.87■□□□□ 0.61
PHGDHO43175 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHGDHO43175 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.87■□□□□ 0.61
PHGDHO43175 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.87■□□□□ 0.61
PHGDHO43175 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHGDHO43175 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
PHGDHO43175 TSPY21P-201ENST00000433481 731 ntBASIC18.87■□□□□ 0.61
PHGDHO43175 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.87■□□□□ 0.61
PHGDHO43175 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
PHGDHO43175 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.87■□□□□ 0.61
PHGDHO43175 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHGDHO43175 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.87■□□□□ 0.61
PHGDHO43175 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.87■□□□□ 0.61
PHGDHO43175 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHGDHO43175 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PHGDHO43175 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHGDHO43175 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.87■□□□□ 0.61
PHGDHO43175 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PHGDHO43175 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
PHGDHO43175 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHGDHO43175 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.86■□□□□ 0.61
PHGDHO43175 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHGDHO43175 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHGDHO43175 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.86■□□□□ 0.61
PHGDHO43175 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHGDHO43175 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.86■□□□□ 0.61
PHGDHO43175 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHGDHO43175 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHGDHO43175 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.86■□□□□ 0.61
PHGDHO43175 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.86■□□□□ 0.61
PHGDHO43175 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PHGDHO43175 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHGDHO43175 KRASP1-201ENST00000407852 552 ntBASIC18.86■□□□□ 0.61
PHGDHO43175 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.86■□□□□ 0.61
PHGDHO43175 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.86■□□□□ 0.61
PHGDHO43175 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.86■□□□□ 0.61
PHGDHO43175 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.86■□□□□ 0.61
PHGDHO43175 AC083906.6-201ENST00000641366 219 ntBASIC18.86■□□□□ 0.61
PHGDHO43175 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHGDHO43175 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.86■□□□□ 0.61
PHGDHO43175 AC090164.3-201ENST00000610780 2143 ntBASIC18.86■□□□□ 0.61
PHGDHO43175 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.86■□□□□ 0.61
PHGDHO43175 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
PHGDHO43175 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PHGDHO43175 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHGDHO43175 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PHGDHO43175 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHGDHO43175 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PHGDHO43175 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHGDHO43175 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHGDHO43175 AC026471.1-201ENST00000564629 3026 ntBASIC18.85■□□□□ 0.61
PHGDHO43175 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PHGDHO43175 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms