Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC188H7C350 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC188H7C350 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.74■□□□□ 0.75
CCDC188H7C350 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CCDC188H7C350 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC188H7C350 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC188H7C350 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC188H7C350 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC188H7C350 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC188H7C350 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.73■□□□□ 0.75
CCDC188H7C350 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC188H7C350 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC188H7C350 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC188H7C350 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC188H7C350 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC188H7C350 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC188H7C350 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 DUSP5P2-201ENST00000426873 1033 ntBASIC19.73■□□□□ 0.75
CCDC188H7C350 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC188H7C350 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC188H7C350 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
CCDC188H7C350 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC188H7C350 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC188H7C350 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC188H7C350 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC188H7C350 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC188H7C350 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC188H7C350 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC188H7C350 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.72■□□□□ 0.75
CCDC188H7C350 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC188H7C350 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC188H7C350 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC188H7C350 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC188H7C350 AL121829.2-201ENST00000620908 328 ntBASIC19.72■□□□□ 0.75
CCDC188H7C350 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC188H7C350 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC188H7C350 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC188H7C350 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC188H7C350 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC188H7C350 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC188H7C350 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC188H7C350 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC188H7C350 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC188H7C350 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC188H7C350 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC188H7C350 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC188H7C350 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC188H7C350 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC188H7C350 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC188H7C350 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC188H7C350 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC188H7C350 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC188H7C350 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC188H7C350 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC188H7C350 AL050303.2-201ENST00000619798 666 ntBASIC19.71■□□□□ 0.75
CCDC188H7C350 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC188H7C350 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC188H7C350 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC188H7C350 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC188H7C350 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC188H7C350 AC090340.1-201ENST00000620778 4980 ntBASIC19.71■□□□□ 0.75
CCDC188H7C350 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC188H7C350 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC188H7C350 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC188H7C350 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC188H7C350 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
CCDC188H7C350 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms