Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
USP27XA6NNY8 ZNRF2P3-201ENST00000424200 374 ntBASIC20.47■□□□□ 0.87
USP27XA6NNY8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.47■□□□□ 0.87
USP27XA6NNY8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
USP27XA6NNY8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
USP27XA6NNY8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.47■□□□□ 0.87
USP27XA6NNY8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 GNAS-203ENST00000306120 1878 ntBASIC20.47■□□□□ 0.87
USP27XA6NNY8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC20.47■□□□□ 0.87
USP27XA6NNY8 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
USP27XA6NNY8 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
USP27XA6NNY8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.47■□□□□ 0.87
USP27XA6NNY8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP27XA6NNY8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.46■□□□□ 0.87
USP27XA6NNY8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.46■□□□□ 0.87
USP27XA6NNY8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.46■□□□□ 0.87
USP27XA6NNY8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP27XA6NNY8 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP27XA6NNY8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP27XA6NNY8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP27XA6NNY8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP27XA6NNY8 AL645608.8-201ENST00000606034 2086 ntBASIC20.46■□□□□ 0.87
USP27XA6NNY8 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC20.46■□□□□ 0.87
USP27XA6NNY8 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.46■□□□□ 0.87
USP27XA6NNY8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.46■□□□□ 0.87
USP27XA6NNY8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.46■□□□□ 0.87
USP27XA6NNY8 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP27XA6NNY8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.46■□□□□ 0.87
USP27XA6NNY8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.46■□□□□ 0.87
USP27XA6NNY8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
USP27XA6NNY8 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP27XA6NNY8 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP27XA6NNY8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC20.46■□□□□ 0.87
USP27XA6NNY8 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP27XA6NNY8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP27XA6NNY8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
USP27XA6NNY8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP27XA6NNY8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.45■□□□□ 0.86
USP27XA6NNY8 TNRC18P3-201ENST00000441896 2691 ntBASIC20.45■□□□□ 0.86
USP27XA6NNY8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP27XA6NNY8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.45■□□□□ 0.86
USP27XA6NNY8 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP27XA6NNY8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.45■□□□□ 0.86
USP27XA6NNY8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP27XA6NNY8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP27XA6NNY8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.45■□□□□ 0.86
USP27XA6NNY8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP27XA6NNY8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.45■□□□□ 0.86
USP27XA6NNY8 AL589743.5-201ENST00000616611 1050 ntBASIC20.45■□□□□ 0.86
USP27XA6NNY8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP27XA6NNY8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
USP27XA6NNY8 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.45■□□□□ 0.86
USP27XA6NNY8 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP27XA6NNY8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.45■□□□□ 0.86
USP27XA6NNY8 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.45■□□□□ 0.86
USP27XA6NNY8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP27XA6NNY8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP27XA6NNY8 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP27XA6NNY8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP27XA6NNY8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP27XA6NNY8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP27XA6NNY8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP27XA6NNY8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP27XA6NNY8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 AC124283.5-201ENST00000624661 1809 ntBASIC20.44■□□□□ 0.86
USP27XA6NNY8 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP27XA6NNY8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP27XA6NNY8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP27XA6NNY8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP27XA6NNY8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP27XA6NNY8 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP27XA6NNY8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
USP27XA6NNY8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USP27XA6NNY8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.44■□□□□ 0.86
USP27XA6NNY8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms