Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RBFOX3A6NFN3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 AC097381.1-201ENST00000429019 1296 ntBASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 SLC25A6P5-201ENST00000435663 894 ntBASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 MIR4466-201ENST00000606121 54 ntBASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 CPT2-209ENST00000636935 803 ntTSL 5 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 GNE-204ENST00000539208 2190 ntTSL 2 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.98□□□□□ -0.01
RBFOX3A6NFN3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 AD000864.1-201ENST00000624076 2295 ntBASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
RBFOX3A6NFN3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms