Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RCCD1A6NED2 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
RCCD1A6NED2 LTB4R2-202ENST00000528054 3092 ntBASIC20.18■□□□□ 0.82
RCCD1A6NED2 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RCCD1A6NED2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RCCD1A6NED2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RCCD1A6NED2 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RCCD1A6NED2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
RCCD1A6NED2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RCCD1A6NED2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RCCD1A6NED2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RCCD1A6NED2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.18■□□□□ 0.82
RCCD1A6NED2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RCCD1A6NED2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RCCD1A6NED2 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.18■□□□□ 0.82
RCCD1A6NED2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RCCD1A6NED2 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.18■□□□□ 0.82
RCCD1A6NED2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RCCD1A6NED2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.18■□□□□ 0.82
RCCD1A6NED2 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
RCCD1A6NED2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RCCD1A6NED2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RCCD1A6NED2 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
RCCD1A6NED2 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RCCD1A6NED2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RCCD1A6NED2 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RCCD1A6NED2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RCCD1A6NED2 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
RCCD1A6NED2 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RCCD1A6NED2 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RCCD1A6NED2 KRT8P41-201ENST00000533985 1514 ntBASIC20.17■□□□□ 0.82
RCCD1A6NED2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.17■□□□□ 0.82
RCCD1A6NED2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RCCD1A6NED2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RCCD1A6NED2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RCCD1A6NED2 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RCCD1A6NED2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.17■□□□□ 0.82
RCCD1A6NED2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RCCD1A6NED2 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RCCD1A6NED2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.17■□□□□ 0.82
RCCD1A6NED2 AL160286.2-201ENST00000567150 934 ntBASIC20.17■□□□□ 0.82
RCCD1A6NED2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RCCD1A6NED2 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RCCD1A6NED2 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RCCD1A6NED2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.17■□□□□ 0.82
RCCD1A6NED2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.17■□□□□ 0.82
RCCD1A6NED2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.17■□□□□ 0.82
RCCD1A6NED2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RCCD1A6NED2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 HEIH-201ENST00000623091 1652 ntBASIC20.16■□□□□ 0.82
RCCD1A6NED2 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RCCD1A6NED2 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RCCD1A6NED2 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RCCD1A6NED2 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RCCD1A6NED2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RCCD1A6NED2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RCCD1A6NED2 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms