Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AL031985.4-201ENST00000642138 673 ntBASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AL138781.2-201ENST00000617896 1843 ntBASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MIR1238-201ENST00000408483 83 ntBASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 C1QL1P1-201ENST00000568105 661 ntBASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TCRBV4S1A1TA0A5B7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 KRT18P16-201ENST00000510337 1294 ntBASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AP000525.1-201ENST00000608286 694 ntBASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AC131212.4-201ENST00000623606 975 ntBASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TCRBV4S1A1TA0A5B7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms