Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.13■□□□□ 0.65
TCRBV9S1A1TA0A576 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV9S1A1TA0A576 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV9S1A1TA0A576 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TCRBV9S1A1TA0A576 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 C1QL1P1-201ENST00000568105 661 ntBASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.12■□□□□ 0.65
TCRBV9S1A1TA0A576 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 AL109923.1-201ENST00000618799 583 ntBASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.11■□□□□ 0.65
TCRBV9S1A1TA0A576 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 AC126763.1-201ENST00000552015 2118 ntBASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 AC073592.3-201ENST00000625118 1834 ntBASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 MIR935-201ENST00000401179 91 ntBASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.1■□□□□ 0.65
TCRBV9S1A1TA0A576 NBPF21P-201ENST00000425093 1451 ntBASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TCRBV9S1A1TA0A576 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms