Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AC020763.4-201ENST00000623414 4170 ntBASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AC112777.1-201ENST00000540175 1423 ntBASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TSPY23P-201ENST00000440136 739 ntBASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AC133552.2-202ENST00000575694 574 ntBASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AC124283.5-201ENST00000624661 1809 ntBASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRBV6-1A0A0K0K1D8 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TREX2-204ENST00000370212 861 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 LINC00896-202ENST00000609602 2128 ntBASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 AC068587.9-201ENST00000641814 219 ntBASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRBV6-1A0A0K0K1D8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms