Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 ALPK1-201ENST00000177648 4537 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 RNU1-32P-201ENST00000363937 159 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 RNA5SP97-201ENST00000365006 84 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 RNA5SP172-201ENST00000365061 118 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 RNU6-198P-201ENST00000384258 104 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 RNU6-1237P-201ENST00000384777 107 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 MIR519A1-201ENST00000385257 85 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 SNORA11-201ENST00000408789 128 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 RNU6-935P-201ENST00000410371 100 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 U3.43-201ENST00000410734 213 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 SNORD63B-201ENST00000411005 70 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 AL161788.1-201ENST00000441805 169 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 RN7SL826P-201ENST00000479724 288 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 SCARNA18.1-201ENST00000516330 83 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 RNU11-2P-201ENST00000516898 142 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 RNA5SP340-201ENST00000517132 107 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 RN7SL708P-201ENST00000580952 299 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 MIR4696-201ENST00000581431 70 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 AC087575.1-201ENST00000585087 229 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 MTRNR2L2-201ENST00000604882 87 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 SNORD96A-201ENST00000606577 79 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 MIR6820-201ENST00000611508 62 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 MIR8054-201ENST00000620877 86 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 U4.3-201ENST00000621047 82 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 AL691477.1-201ENST00000624398 162 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 RNA5SP196-201ENST00000625967 102 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 MIR4773-1-201ENST00000637203 78 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 5S_rRNA.28-201ENST00000638107 119 ntBASIC2.1□□□□□ -2.07
LCE4AQ5TA78 OR2T35-202ENST00000641268 2957 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 MAMDC2-201ENST00000377182 3616 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 CTNND1-220ENST00000529526 6099 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 TMED8-201ENST00000216468 7784 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 CHD7-203ENST00000525508 4777 ntTSL 5 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 TTC21A-205ENST00000440121 3941 ntAPPRIS P3 TSL 2 BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
LCE4AQ5TA78 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 LPL-201ENST00000311322 3846 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 MAPK10-253ENST00000641010 4072 ntBASIC2.09□□□□□ -2.07
LCE4AQ5TA78 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 ZBTB21-203ENST00000398499 5806 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 ABLIM3-202ENST00000326685 4164 ntTSL 5 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 LIG4-204ENST00000611712 4180 ntAPPRIS P1 TSL 4 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 ZNF300-203ENST00000418587 3226 ntTSL 2 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
LCE4AQ5TA78 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms