RNA–Protein interactions for RNA: ENST00000525528.1

BDNF-212, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 BASIC

Gene BDNF, Length 4,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-212ENST00000525528 DCAF8L2P0C7V8 631 aa12.53□□□□□ -0.4
BDNF-212ENST00000525528 FAM9AQ8IZU1 332 aaPredicted RBP11.57□□□□□ -0.56
BDNF-212ENST00000525528 NISCHQ9Y2I1 1504 aa11.48□□□□□ -0.57
BDNF-212ENST00000525528 SUPT5HO00267 1087 aaKnown RBP11.36□□□□□ -0.59
BDNF-212ENST00000525528 APLP2Q06481 763 aa11.26□□□□□ -0.61
BDNF-212ENST00000525528 PELP1Q8IZL8 1130 aaKnown RBP11.18□□□□□ -0.62
BDNF-212ENST00000525528 MYT1Q01538 1121 aa11.12□□□□□ -0.63
BDNF-212ENST00000525528 EHMT2Q96KQ7 1210 aa11.05□□□□□ -0.64
BDNF-212ENST00000525528 SHROOM4Q9ULL8 1493 aa11.04□□□□□ -0.64
BDNF-212ENST00000525528 ATP1B4Q9UN42 357 aaPredicted RBP10.88□□□□□ -0.67
BDNF-212ENST00000525528 MYT1LQ9UL68 1186 aa10.78□□□□□ -0.68
BDNF-212ENST00000525528 RANGAP1P46060 587 aaPredicted RBP10.76□□□□□ -0.69
BDNF-212ENST00000525528 TTBK1Q5TCY1 1321 aaPredicted RBP10.64□□□□□ -0.71
BDNF-212ENST00000525528 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.64□□□□□ -0.71
BDNF-212ENST00000525528 HNRNPUL2Q1KMD3 747 aaKnown RBP10.64□□□□□ -0.71
BDNF-212ENST00000525528 UBTFP17480 764 aaKnown RBP10.63□□□□□ -0.71
BDNF-212ENST00000525528 TRIM41Q8WV44 630 aa10.6□□□□□ -0.71
BDNF-212ENST00000525528 CCER1Q8TC90 406 aaPredicted RBP10.49□□□□□ -0.73
BDNF-212ENST00000525528 PCGF6Q9BYE7 350 aa10.44□□□□□ -0.74
BDNF-212ENST00000525528 CHIC1Q5VXU3 224 aa10.41□□□□□ -0.74
BDNF-212ENST00000525528 ERICH6Q7L0X2 663 aa10.37□□□□□ -0.75
BDNF-212ENST00000525528 NEFLP07196 543 aa10.31□□□□□ -0.76
BDNF-212ENST00000525528 SLC4A1APQ9BWU0 796 aaKnown RBP10.31□□□□□ -0.76
BDNF-212ENST00000525528 POLR3GLQ9BT43 218 aa10.28□□□□□ -0.76
BDNF-212ENST00000525528 ZEB1P37275 1124 aaPredicted RBP10.27□□□□□ -0.77
BDNF-212ENST00000525528 CENPBP07199 599 aaPredicted RBP10.26□□□□□ -0.77
BDNF-212ENST00000525528 HRCP23327 699 aa10.25□□□□□ -0.77
BDNF-212ENST00000525528 FBLN2P98095 1184 aa10.24□□□□□ -0.77
BDNF-212ENST00000525528 ITGAEP38570 1179 aa10.23□□□□□ -0.77
BDNF-212ENST00000525528 ESF1Q9H501 851 aaKnown RBP10.2□□□□□ -0.78
BDNF-212ENST00000525528 BCANQ96GW7 911 aa10.17□□□□□ -0.78
BDNF-212ENST00000525528 PABPN1Q86U42 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
BDNF-212ENST00000525528 DAXXQ9UER7 740 aaPredicted RBP10.14□□□□□ -0.79
BDNF-212ENST00000525528 NPM1P06748 294 aaKnown RBP eCLIP10.13□□□□□ -0.79
BDNF-212ENST00000525528 ABCC9O60706 1549 aa10.11□□□□□ -0.79
BDNF-212ENST00000525528 CNGB1Q14028 1251 aaPredicted RBP10.05□□□□□ -0.8
BDNF-212ENST00000525528 TRIM52Q96A61 297 aa10.03□□□□□ -0.8
BDNF-212ENST00000525528 NEFMP07197 916 aa10.03□□□□□ -0.8
BDNF-212ENST00000525528 SLC24A1O60721 1099 aa10.02□□□□□ -0.81
BDNF-212ENST00000525528 ZBTB47Q9UFB7 747 aaPredicted RBP10.01□□□□□ -0.81
BDNF-212ENST00000525528 PPARGC1BQ86YN6 1023 aaKnown RBP10□□□□□ -0.81
BDNF-212ENST00000525528 FAM50AQ14320 339 aaKnown RBP9.99□□□□□ -0.81
BDNF-212ENST00000525528 STAG3Q9UJ98 1225 aa9.98□□□□□ -0.81
BDNF-212ENST00000525528 CLSPNQ9HAW4 1339 aa9.98□□□□□ -0.81
BDNF-212ENST00000525528 CDK11AQ9UQ88 783 aaPredicted RBP9.97□□□□□ -0.81
BDNF-212ENST00000525528 PLPPR3Q6T4P5 718 aa9.95□□□□□ -0.82
BDNF-212ENST00000525528 YTHDC1Q96MU7 727 aaKnown RBP9.93□□□□□ -0.82
BDNF-212ENST00000525528 TRIM26Q12899 539 aaPredicted RBP9.92□□□□□ -0.82
BDNF-212ENST00000525528 ZNF326Q5BKZ1 582 aaKnown RBP9.89□□□□□ -0.83
BDNF-212ENST00000525528 LOC105371045A0A1W2PR82 267 aa9.87□□□□□ -0.83
BDNF-212ENST00000525528 ZNF777Q9ULD5 760 aaPredicted RBP9.84□□□□□ -0.83
BDNF-212ENST00000525528 CHGAP10645 457 aaKnown RBP9.84□□□□□ -0.83
BDNF-212ENST00000525528 NPM2Q86SE8 214 aaKnown RBP9.83□□□□□ -0.84
BDNF-212ENST00000525528 ARID3CA6NKF2 412 aa9.81□□□□□ -0.84
BDNF-212ENST00000525528 ZNF316A6NFI3 1004 aaPredicted RBP9.81□□□□□ -0.84
BDNF-212ENST00000525528 GTF3C3Q9Y5Q9 886 aa9.79□□□□□ -0.84
BDNF-212ENST00000525528 SCAF1Q9H7N4 1312 aaKnown RBP9.78□□□□□ -0.84
BDNF-212ENST00000525528 A0A0G2JS52 829 aa9.77□□□□□ -0.85
BDNF-212ENST00000525528 CANXP27824 592 aaKnown RBP9.76□□□□□ -0.85
BDNF-212ENST00000525528 NEUROD1Q13562 356 aa9.75□□□□□ -0.85
BDNF-212ENST00000525528 P3H3Q8IVL6 736 aa9.75□□□□□ -0.85
BDNF-212ENST00000525528 C14orf37Q86TY3 774 aa9.74□□□□□ -0.85
BDNF-212ENST00000525528 CHMP7Q8WUX9 453 aaPredicted RBP9.73□□□□□ -0.85
BDNF-212ENST00000525528 ACIN1Q9UKV3 1341 aaKnown RBP9.72□□□□□ -0.85
BDNF-212ENST00000525528 HAP1P54257 671 aaPredicted RBP9.72□□□□□ -0.85
BDNF-212ENST00000525528 BCL11AQ9H165 835 aa9.71□□□□□ -0.85
BDNF-212ENST00000525528 ARID4BQ4LE39 1312 aaPredicted RBP9.7□□□□□ -0.86
BDNF-212ENST00000525528 TRHP20396 242 aaPredicted RBP9.68□□□□□ -0.86
BDNF-212ENST00000525528 TSPY4P0CV99 314 aa9.68□□□□□ -0.86
BDNF-212ENST00000525528 TSPY10P0CW01 314 aa9.68□□□□□ -0.86
BDNF-212ENST00000525528 PPP1R15AO75807 674 aaPredicted RBP9.67□□□□□ -0.86
BDNF-212ENST00000525528 ANP32CO43423 234 aa9.64□□□□□ -0.87
BDNF-212ENST00000525528 RTL5Q5HYW3 569 aaPredicted RBP9.64□□□□□ -0.87
BDNF-212ENST00000525528 ZCCHC6Q5VYS8 1495 aaKnown RBP9.63□□□□□ -0.87
BDNF-212ENST00000525528 DCAF1Q9Y4B6 1507 aa9.62□□□□□ -0.87
BDNF-212ENST00000525528 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.61□□□□□ -0.87
BDNF-212ENST00000525528 CSRNP3Q8WYN3 585 aa9.61□□□□□ -0.87
BDNF-212ENST00000525528 MYO15BQ96JP2 1530 aa9.6□□□□□ -0.87
BDNF-212ENST00000525528 ZBTB7CA1YPR0 619 aa9.56□□□□□ -0.88
BDNF-212ENST00000525528 KCNH8Q96L42 1107 aa9.56□□□□□ -0.88
BDNF-212ENST00000525528 PLEKHG5O94827 1062 aa9.55□□□□□ -0.88
BDNF-212ENST00000525528 DIEXFQ68CQ4 756 aaKnown RBP9.54□□□□□ -0.88
BDNF-212ENST00000525528 PLEKHD1A6NEE1 506 aa9.54□□□□□ -0.88
BDNF-212ENST00000525528 NPHP1O15259 732 aa9.51□□□□□ -0.89
BDNF-212ENST00000525528 ANP32EQ9BTT0 268 aa9.5□□□□□ -0.89
BDNF-212ENST00000525528 CDK11BP21127 795 aaKnown RBP9.5□□□□□ -0.89
BDNF-212ENST00000525528 LMOD2Q6P5Q4 547 aa9.49□□□□□ -0.89
BDNF-212ENST00000525528 ARXQ96QS3 562 aa9.48□□□□□ -0.89
BDNF-212ENST00000525528 SCRIBQ14160 1630 aa9.48□□□□□ -0.89
BDNF-212ENST00000525528 ERCC6Q03468 1493 aa9.47□□□□□ -0.89
BDNF-212ENST00000525528 TONSLQ96HA7 1378 aa9.47□□□□□ -0.89
BDNF-212ENST00000525528 HSP90AA1P07900 732 aaKnown RBP9.47□□□□□ -0.89
BDNF-212ENST00000525528 HDGFP51858 240 aaKnown RBP9.47□□□□□ -0.89
BDNF-212ENST00000525528 MTUS2Q5JR59 1369 aa9.45□□□□□ -0.9
BDNF-212ENST00000525528 AEBP2Q6ZN18 517 aaPredicted RBP9.44□□□□□ -0.9
BDNF-212ENST00000525528 CHIC2Q9UKJ5 165 aa9.44□□□□□ -0.9
BDNF-212ENST00000525528 UPF2Q9HAU5 1272 aaKnown RBP9.43□□□□□ -0.9
BDNF-212ENST00000525528 CCDC180Q9P1Z9 1646 aa9.42□□□□□ -0.9
BDNF-212ENST00000525528 PRKCSHP14314 528 aaPredicted RBP9.42□□□□□ -0.9
BDNF-212ENST00000525528 WDR43Q15061 677 aaKnown RBP eCLIP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms