RNA–Protein interactions for RNA: ENST00000636035.1

DCX-208, Transcript of doublecortin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene DCX, Length 9,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCX-208ENST00000636035 MYT1Q01538 1121 aa12.9□□□□□ -0.34
DCX-208ENST00000636035 PELP1Q8IZL8 1130 aaKnown RBP12.85□□□□□ -0.35
DCX-208ENST00000636035 NISCHQ9Y2I1 1504 aa12.63□□□□□ -0.39
DCX-208ENST00000636035 DCAF8L2P0C7V8 631 aa12.41□□□□□ -0.42
DCX-208ENST00000636035 ZEB1P37275 1124 aaPredicted RBP12.29□□□□□ -0.44
DCX-208ENST00000636035 CENPBP07199 599 aaPredicted RBP12.27□□□□□ -0.44
DCX-208ENST00000636035 CCER1Q8TC90 406 aaPredicted RBP12.21□□□□□ -0.45
DCX-208ENST00000636035 SUPT5HO00267 1087 aaKnown RBP12.13□□□□□ -0.47
DCX-208ENST00000636035 ERICH6Q7L0X2 663 aa12.12□□□□□ -0.47
DCX-208ENST00000636035 PCGF6Q9BYE7 350 aa11.9□□□□□ -0.5
DCX-208ENST00000636035 APLP2Q06481 763 aa11.84□□□□□ -0.51
DCX-208ENST00000636035 TTBK1Q5TCY1 1321 aaPredicted RBP11.8□□□□□ -0.52
DCX-208ENST00000636035 NEFLP07196 543 aa11.79□□□□□ -0.52
DCX-208ENST00000636035 HRCP23327 699 aa11.77□□□□□ -0.53
DCX-208ENST00000636035 YTHDC1Q96MU7 727 aaKnown RBP11.76□□□□□ -0.53
DCX-208ENST00000636035 SHROOM4Q9ULL8 1493 aa11.66□□□□□ -0.54
DCX-208ENST00000636035 TRIM26Q12899 539 aaPredicted RBP11.61□□□□□ -0.55
DCX-208ENST00000636035 FAM9AQ8IZU1 332 aaPredicted RBP11.5□□□□□ -0.57
DCX-208ENST00000636035 EHMT2Q96KQ7 1210 aa11.42□□□□□ -0.58
DCX-208ENST00000636035 DAXXQ9UER7 740 aaPredicted RBP11.42□□□□□ -0.58
DCX-208ENST00000636035 TRIM41Q8WV44 630 aa11.39□□□□□ -0.59
DCX-208ENST00000636035 RTL5Q5HYW3 569 aaPredicted RBP11.39□□□□□ -0.59
DCX-208ENST00000636035 CLSPNQ9HAW4 1339 aa11.32□□□□□ -0.6
DCX-208ENST00000636035 MYT1LQ9UL68 1186 aa11.3□□□□□ -0.6
DCX-208ENST00000636035 DIEXFQ68CQ4 756 aaKnown RBP11.25□□□□□ -0.61
DCX-208ENST00000636035 GTF3C3Q9Y5Q9 886 aa11.18□□□□□ -0.62
DCX-208ENST00000636035 ACIN1Q9UKV3 1341 aaKnown RBP11.17□□□□□ -0.62
DCX-208ENST00000636035 UBTFP17480 764 aaKnown RBP11.16□□□□□ -0.62
DCX-208ENST00000636035 ZNF316A6NFI3 1004 aaPredicted RBP11.14□□□□□ -0.63
DCX-208ENST00000636035 GLIPR1L2Q4G1C9 344 aa11.13□□□□□ -0.63
DCX-208ENST00000636035 CDK11AQ9UQ88 783 aaPredicted RBP11.13□□□□□ -0.63
DCX-208ENST00000636035 PPARGC1BQ86YN6 1023 aaKnown RBP11.1□□□□□ -0.63
DCX-208ENST00000636035 CHIC1Q5VXU3 224 aa11.08□□□□□ -0.64
DCX-208ENST00000636035 ANP32AP39687 249 aaKnown RBP10.95□□□□□ -0.66
DCX-208ENST00000636035 ATP1B4Q9UN42 357 aaPredicted RBP10.91□□□□□ -0.66
DCX-208ENST00000636035 ANP32CO43423 234 aa10.9□□□□□ -0.66
DCX-208ENST00000636035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.89□□□□□ -0.67
DCX-208ENST00000636035 LOC105371045A0A1W2PR82 267 aa10.88□□□□□ -0.67
DCX-208ENST00000636035 RANGAP1P46060 587 aaPredicted RBP10.88□□□□□ -0.67
DCX-208ENST00000636035 HNRNPUL2Q1KMD3 747 aaKnown RBP10.85□□□□□ -0.67
DCX-208ENST00000636035 DCAF1Q9Y4B6 1507 aa10.85□□□□□ -0.67
DCX-208ENST00000636035 EIF5BO60841 1220 aaKnown RBP10.8□□□□□ -0.68
DCX-208ENST00000636035 BCANQ96GW7 911 aa10.8□□□□□ -0.68
DCX-208ENST00000636035 ANP32BQ92688 251 aaKnown RBP10.8□□□□□ -0.68
DCX-208ENST00000636035 ANP32EQ9BTT0 268 aa10.78□□□□□ -0.68
DCX-208ENST00000636035 SCAF1Q9H7N4 1312 aaKnown RBP10.76□□□□□ -0.69
DCX-208ENST00000636035 POLR3GLQ9BT43 218 aa10.73□□□□□ -0.69
DCX-208ENST00000636035 ITGAEP38570 1179 aa10.71□□□□□ -0.7
DCX-208ENST00000636035 ZBTB47Q9UFB7 747 aaPredicted RBP10.7□□□□□ -0.7
DCX-208ENST00000636035 NEUROD1Q13562 356 aa10.69□□□□□ -0.7
DCX-208ENST00000636035 FKBP8Q14318 412 aa10.69□□□□□ -0.7
DCX-208ENST00000636035 DDRGK1Q96HY6 314 aa10.62□□□□□ -0.71
DCX-208ENST00000636035 UPF2Q9HAU5 1272 aaKnown RBP10.62□□□□□ -0.71
DCX-208ENST00000636035 TNNT2P45379 298 aaPredicted RBP10.61□□□□□ -0.71
DCX-208ENST00000636035 ERICH6BQ5W0A0 696 aa10.58□□□□□ -0.71
DCX-208ENST00000636035 PPM1GO15355 546 aaPredicted RBP10.57□□□□□ -0.72
DCX-208ENST00000636035 BCL11AQ9H165 835 aa10.56□□□□□ -0.72
DCX-208ENST00000636035 ABCC9O60706 1549 aa10.56□□□□□ -0.72
DCX-208ENST00000636035 NPM2Q86SE8 214 aaKnown RBP10.55□□□□□ -0.72
DCX-208ENST00000636035 CANXP27824 592 aaKnown RBP10.54□□□□□ -0.72
DCX-208ENST00000636035 FAM50AQ14320 339 aaKnown RBP10.54□□□□□ -0.72
DCX-208ENST00000636035 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.52□□□□□ -0.73
DCX-208ENST00000636035 CCDC180Q9P1Z9 1646 aa10.52□□□□□ -0.73
DCX-208ENST00000636035 TRIM44Q96DX7 344 aaPredicted RBP10.51□□□□□ -0.73
DCX-208ENST00000636035 NBR1Q14596 966 aa10.51□□□□□ -0.73
DCX-208ENST00000636035 TRIM52Q96A61 297 aa10.51□□□□□ -0.73
DCX-208ENST00000636035 CCDC136Q96JN2 1154 aa10.51□□□□□ -0.73
DCX-208ENST00000636035 NCLP19338 710 aaKnown RBP10.5□□□□□ -0.73
DCX-208ENST00000636035 HNRNPUQ00839 825 aaKnown RBP eCLIP10.48□□□□□ -0.73
DCX-208ENST00000636035 BECN1Q14457 450 aa10.48□□□□□ -0.73
DCX-208ENST00000636035 ZCCHC6Q5VYS8 1495 aaKnown RBP10.47□□□□□ -0.73
DCX-208ENST00000636035 CNGB1Q14028 1251 aaPredicted RBP10.47□□□□□ -0.73
DCX-208ENST00000636035 HSP90AA1P07900 732 aaKnown RBP10.47□□□□□ -0.73
DCX-208ENST00000636035 NEFMP07197 916 aa10.44□□□□□ -0.74
DCX-208ENST00000636035 TONSLQ96HA7 1378 aa10.42□□□□□ -0.74
DCX-208ENST00000636035 MIER1Q8N108 512 aa10.41□□□□□ -0.74
DCX-208ENST00000636035 SLC4A1APQ9BWU0 796 aaKnown RBP10.41□□□□□ -0.74
DCX-208ENST00000636035 CSRNP3Q8WYN3 585 aa10.4□□□□□ -0.74
DCX-208ENST00000636035 NOP58Q9Y2X3 529 aaKnown RBP10.4□□□□□ -0.74
DCX-208ENST00000636035 GOLGA6L22H0YM25 854 aa10.39□□□□□ -0.75
DCX-208ENST00000636035 PABPN1Q86U42 306 aaKnown RBP eCLIP10.38□□□□□ -0.75
DCX-208ENST00000636035 PPP4R2Q9NY27 417 aa10.37□□□□□ -0.75
DCX-208ENST00000636035 L1TD1Q5T7N2 865 aaKnown RBP10.37□□□□□ -0.75
DCX-208ENST00000636035 DDX10Q13206 875 aaKnown RBP10.36□□□□□ -0.75
DCX-208ENST00000636035 SUPT16HQ9Y5B9 1047 aaKnown RBP10.34□□□□□ -0.75
DCX-208ENST00000636035 NAP1L5Q96NT1 182 aaPredicted RBP10.33□□□□□ -0.76
DCX-208ENST00000636035 CDK11BP21127 795 aaKnown RBP10.33□□□□□ -0.76
DCX-208ENST00000636035 DEKP35659 375 aaKnown RBP10.33□□□□□ -0.76
DCX-208ENST00000636035 FAM9BQ8IZU0 186 aa10.31□□□□□ -0.76
DCX-208ENST00000636035 TMC1Q8TDI8 760 aa10.31□□□□□ -0.76
DCX-208ENST00000636035 MRS2Q9HD23 443 aa10.28□□□□□ -0.76
DCX-208ENST00000636035 PTMSP20962 102 aa10.28□□□□□ -0.76
DCX-208ENST00000636035 ZNF326Q5BKZ1 582 aaKnown RBP10.27□□□□□ -0.77
DCX-208ENST00000636035 EEA1Q15075 1411 aa10.26□□□□□ -0.77
DCX-208ENST00000636035 SCRIBQ14160 1630 aa10.25□□□□□ -0.77
DCX-208ENST00000636035 RBM19Q9Y4C8 960 aaKnown RBP10.24□□□□□ -0.77
DCX-208ENST00000636035 CCER2I3L3R5 266 aa10.24□□□□□ -0.77
DCX-208ENST00000636035 RB1CC1Q8TDY2 1594 aa10.23□□□□□ -0.77
DCX-208ENST00000636035 NACADO15069 1562 aa10.23□□□□□ -0.77
DCX-208ENST00000636035 WDR43Q15061 677 aaKnown RBP eCLIP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms