Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHB1Q9Y5F3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHB1Q9Y5F3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 AL161938.1-201ENST00000569833 2180 ntBASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 AC006011.2-201ENST00000621313 1158 ntBASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 AC131212.4-201ENST00000623606 975 ntBASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHB1Q9Y5F3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 FP475955.4-201ENST00000623131 1990 ntBASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 AP000974.1-201ENST00000623909 2387 ntBASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHB1Q9Y5F3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHB1Q9Y5F3 MESTP1-201ENST00000404287 994 ntBASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms