Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 AL020996.1-203ENST00000536896 2307 ntBASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 CRYGFP-201ENST00000418459 633 ntBASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 AC097488.1-201ENST00000507834 756 ntBASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 RNF165-205ENST00000588679 2904 ntBASIC18.6■□□□□ 0.57
PCDHB11Q9Y5F2 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 TNXA-203ENST00000507684 2038 ntBASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 MESTP1-201ENST00000404287 994 ntBASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 Z85996.1-201ENST00000494644 937 ntBASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 AC010203.1-204ENST00000548782 407 ntBASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 SDHAP1-207ENST00000440850 2000 ntBASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
PCDHB11Q9Y5F2 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
PCDHB11Q9Y5F2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHB11Q9Y5F2 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB11Q9Y5F2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHB11Q9Y5F2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB11Q9Y5F2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHB11Q9Y5F2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHB11Q9Y5F2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
PCDHB11Q9Y5F2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHB11Q9Y5F2 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 TSPY14P-201ENST00000303979 915 ntBASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 ECEL1P2-202ENST00000465689 757 ntBASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHB11Q9Y5F2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHB11Q9Y5F2 AL032819.2-201ENST00000624543 2162 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms