Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 AL031284.1-201ENST00000419297 478 ntBASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 AC092667.1-201ENST00000434301 2586 ntBASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.46■□□□□ 0.71
HCN4Q9Y3Q4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 AC093525.10-201ENST00000625130 1569 ntBASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 AC011484.1-201ENST00000377652 1995 ntBASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 FAM8A3P-201ENST00000427218 844 ntBASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 MIR3687-2-201ENST00000577708 61 ntBASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 MIR3687-1-201ENST00000614492 61 ntBASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HCN4Q9Y3Q4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 AL035633.1-201ENST00000406139 838 ntBASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 AC004967.1-201ENST00000453589 447 ntBASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 AC010327.4-202ENST00000591484 748 ntBASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HCN4Q9Y3Q4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 KRT8P20-201ENST00000423953 1409 ntBASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 KRT8P36-201ENST00000489121 1440 ntBASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 HLA-J-202ENST00000469281 1241 ntBASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 RPL13AP23-201ENST00000480739 586 ntBASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 HLA-A-209ENST00000638375 975 ntBASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HCN4Q9Y3Q4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCN4Q9Y3Q4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCN4Q9Y3Q4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCN4Q9Y3Q4 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HCN4Q9Y3Q4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCN4Q9Y3Q4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCN4Q9Y3Q4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
HCN4Q9Y3Q4 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
HCN4Q9Y3Q4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms