Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PRDM4Q9UKN5 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PRDM4Q9UKN5 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 AP001094.4-201ENST00000579008 2176 ntBASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PRDM4Q9UKN5 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 MIR939-201ENST00000401314 82 ntBASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 AC110285.6-201ENST00000617652 491 ntBASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
PRDM4Q9UKN5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 AC009237.3-201ENST00000393279 1427 ntBASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 AL136967.2-201ENST00000623968 743 ntBASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC19.55■□□□□ 0.72
PRDM4Q9UKN5 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM4Q9UKN5 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM4Q9UKN5 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM4Q9UKN5 AC104581.4-201ENST00000623126 3052 ntBASIC19.54■□□□□ 0.72
PRDM4Q9UKN5 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM4Q9UKN5 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PRDM4Q9UKN5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms