Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MKS1Q9NXB0 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MKS1Q9NXB0 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MKS1Q9NXB0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
MKS1Q9NXB0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 AC026185.1-201ENST00000445748 174 ntBASIC18.77■□□□□ 0.6
MKS1Q9NXB0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 AC092437.1-201ENST00000624794 1048 ntBASIC18.77■□□□□ 0.6
MKS1Q9NXB0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
MKS1Q9NXB0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
MKS1Q9NXB0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MKS1Q9NXB0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MKS1Q9NXB0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
MKS1Q9NXB0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
MKS1Q9NXB0 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 MTMR9LP-203ENST00000426597 1545 ntBASIC18.76■□□□□ 0.59
MKS1Q9NXB0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 AL160286.2-201ENST00000567150 934 ntBASIC18.76■□□□□ 0.59
MKS1Q9NXB0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
MKS1Q9NXB0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 CROCCP5-201ENST00000436658 830 ntBASIC18.75■□□□□ 0.59
MKS1Q9NXB0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 AL121832.2-201ENST00000610979 668 ntBASIC18.75■□□□□ 0.59
MKS1Q9NXB0 HLA-A-209ENST00000638375 975 ntBASIC18.75■□□□□ 0.59
MKS1Q9NXB0 AC068587.9-201ENST00000641814 219 ntBASIC18.75■□□□□ 0.59
MKS1Q9NXB0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
MKS1Q9NXB0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 RCC2P6-201ENST00000526625 1557 ntBASIC18.74■□□□□ 0.59
MKS1Q9NXB0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
MKS1Q9NXB0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms