Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 FAM8A6P-201ENST00000407496 1135 ntBASIC19.6■□□□□ 0.73
VPS45Q9NRW7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 CRYGFP-201ENST00000418459 633 ntBASIC19.59■□□□□ 0.73
VPS45Q9NRW7 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.59■□□□□ 0.73
VPS45Q9NRW7 B3GAT3P1-201ENST00000471720 806 ntBASIC19.59■□□□□ 0.73
VPS45Q9NRW7 AC097488.1-201ENST00000507834 756 ntBASIC19.59■□□□□ 0.73
VPS45Q9NRW7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 AL121894.2-201ENST00000602977 491 ntBASIC19.59■□□□□ 0.73
VPS45Q9NRW7 FAM87A-204ENST00000613235 858 ntBASIC19.59■□□□□ 0.73
VPS45Q9NRW7 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
VPS45Q9NRW7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
VPS45Q9NRW7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.58■□□□□ 0.73
VPS45Q9NRW7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.58■□□□□ 0.73
VPS45Q9NRW7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
VPS45Q9NRW7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS45Q9NRW7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.58■□□□□ 0.73
VPS45Q9NRW7 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
VPS45Q9NRW7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 AC117947.1-201ENST00000427448 529 ntBASIC19.58■□□□□ 0.72
VPS45Q9NRW7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 MYC-208ENST00000641036 567 ntBASIC19.58■□□□□ 0.72
VPS45Q9NRW7 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
VPS45Q9NRW7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 RNF152P1-201ENST00000397754 604 ntBASIC19.57■□□□□ 0.72
VPS45Q9NRW7 AL031133.1-201ENST00000406807 723 ntBASIC19.57■□□□□ 0.72
VPS45Q9NRW7 HMGA1P5-201ENST00000412453 271 ntBASIC19.57■□□□□ 0.72
VPS45Q9NRW7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 KRT18P48-201ENST00000434763 852 ntBASIC19.57■□□□□ 0.72
VPS45Q9NRW7 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 HLA-A-209ENST00000638375 975 ntBASIC19.57■□□□□ 0.72
VPS45Q9NRW7 AP000550.4-202ENST00000639755 178 ntBASIC19.57■□□□□ 0.72
VPS45Q9NRW7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.57■□□□□ 0.72
VPS45Q9NRW7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms