Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 AC145285.6-201ENST00000604632 637 ntBASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 AL023803.3-201ENST00000615559 522 ntBASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 AC010947.1-201ENST00000623454 693 ntBASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRIM62Q9BVG3 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 LINC01568-207ENST00000641790 1380 ntBASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRIM62Q9BVG3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 KRT8P9-201ENST00000558927 1449 ntBASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 AL512604.3-201ENST00000569583 964 ntBASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 CYP2D8P-201ENST00000433633 1490 ntBASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRIM62Q9BVG3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 AC092338.2-201ENST00000568827 1415 ntBASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 LINC01023-201ENST00000606054 436 ntBASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRIM62Q9BVG3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 AC133561.5-201ENST00000635547 218 ntBASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 AC097493.4-201ENST00000641197 219 ntBASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM62Q9BVG3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
TRIM62Q9BVG3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM62Q9BVG3 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms